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在禾谷镰刀菌中进行的 QTL 作图鉴定出一个参与降低侵袭性的 FgVe1 等位基因。

QTL mapping in Fusarium graminearum identified an allele of FgVe1 involved in reduced aggressiveness.

机构信息

INRAE, MycSA, F-33882 Villenave d'Ornon, France.

INRAE, MycSA, F-33882 Villenave d'Ornon, France; Université de Bordeaux, INRAE, EGFV, F-33882 Villenave d'Ornon, France.

出版信息

Fungal Genet Biol. 2021 Aug;153:103566. doi: 10.1016/j.fgb.2021.103566. Epub 2021 May 12.

DOI:10.1016/j.fgb.2021.103566
PMID:33991664
Abstract

Fusarium graminearum is one of the most frequent causal agents of the Fusarium Head Blight, a cereal disease spread throughout the world, reducing grain production and quality. F. graminearum isolates are genetically and phenotypically highly diverse. Notably, remarkable variations of aggressiveness between isolates have been observed, which could reflect an adaptive potential of this pathogen. In this study, we aimed to characterize the genetic basis of aggressiveness variation observed in an F1 population (n = 94), for which genome sequences of both parental strains are available. Aggressiveness was assessed by a panel of in planta and in vitro proxies during two phenotyping trials including, among others, disease severity and mycotoxin accumulation in wheat spike. One major and single QTL was mapped for all the traits measured, on chromosome I, that explained up to 90% of the variance for disease severity. The confidence interval at the QTL spanned 1.2 Mb and contained 428 genes on the reference genome. Of these, four candidates were selected based on the postulate that a non-synonymous mutation affecting protein function may be responsible for phenotypic differences. Finally, a new mutation was identified and functionally validated in the gene FgVe1, coding for a velvet protein known to be involved in pathogenicity and secondary metabolism production in several fungi.

摘要

镰刀菌禾谷孢是最常见的赤霉病病原菌之一,赤霉病是一种世界性的谷类病害,会降低谷物的产量和质量。禾谷镰刀菌的分离株在遗传和表型上具有高度的多样性。值得注意的是,已经观察到分离株之间存在显著的侵袭力变异,这可能反映了该病原体的适应潜力。在这项研究中,我们旨在描述一个 F1 群体(n=94)中观察到的侵袭力变异的遗传基础,该群体的两个亲本菌株的基因组序列都可用。通过在两个表型试验中使用一系列体内和体外探针评估侵袭力,其中包括小麦穗中疾病严重程度和霉菌毒素积累等。在这两个试验中,在第一号染色体上定位到了一个主要的单一 QTL,可解释所有测量性状的高达 90%的变异。在 QTL 的置信区间内跨越了 1.2 Mb,包含参考基因组上的 428 个基因。其中,基于以下假设选择了四个候选基因,即影响蛋白功能的非同义突变可能是导致表型差异的原因:四个候选基因分别是编码 velvet 蛋白的 FgVe1 基因, velvet 蛋白已知在几种真菌的致病性和次生代谢产物的产生中起作用。

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