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不可侵犯黄杆菌属的新种,从溪流水中分离得到。

Flavobacterium inviolabile sp. nov. isolated from stream water.

机构信息

Division of Biotechnology, Jeonbuk National University, Iksan, 54596, Republic of Korea.

Department of Environmental Biotechnology, University of Science and Technology, Daejeon, 34113, Republic of Korea.

出版信息

Arch Microbiol. 2021 Aug;203(6):3633-3639. doi: 10.1007/s00203-021-02221-w. Epub 2021 May 15.

Abstract

A Gram-stain-negative, rod-shaped, aerobic and non-motile bacterium, designated P2-65, was isolated from Moonsan stream water in the Republic of Korea. The temperature, NaCl concentration and pH ranges for growth of strain P2-65 were 10-37 °C, 0.0-3.0% (w/v) and 6.5-8.5 with optimum growth at 25-30 °C, 0.0-1.0% and 7.0-7.5, respectively. Comparison of 16S rRNA gene sequence showed that strain P2-65 was closely related to Flavobacterium cauense (95.4%) and Flavobacterium cheniae (95.3%). The major fatty acids were iso-C, iso C 3-OH, summed feature 3 (Cω7c and/or Cω6c), summed feature 9 (iso-C ω9c and/or 10-methyl C) and iso-C 3-OH. The predominant respiratory quinone was menaquinone-6 (MK-6). The major polar lipids detected in the strain were phosphatidylethanolamine, one aminophospholipid, one unidentified aminolipid and one unidentified polar lipid. The G + C content of the genomic DNA was 39.7%. The average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values for strain P2-65 with closely related Flavobacterium species were below 74.8% and 20%, respectively. Based on polyphasic features, strain P2-65 is considered to represent a novel species of the genus Flavobacterium, for which the name Flavobacterium inviolabile sp. nov. is proposed. The type strain is P2-65 (= KCTC 62055 = NBRC 112953).

摘要

一株革兰氏阴性、杆状、需氧、非运动的细菌,被命名为 P2-65,从韩国 Moonsan 溪流水中分离得到。菌株 P2-65 的生长温度、NaCl 浓度和 pH 值范围分别为 10-37°C、0.0-3.0%(w/v)和 6.5-8.5,最适生长温度、NaCl 浓度和 pH 值分别为 25-30°C、0.0-1.0%和 7.0-7.5。16S rRNA 基因序列比较表明,菌株 P2-65 与 Flavobacterium cauense(95.4%)和 Flavobacterium cheniae(95.3%)密切相关。主要脂肪酸为 iso-C、iso C 3-OH、summed feature 3(Cω7c 和/或 Cω6c)、summed feature 9(iso-C ω9c 和/或 10-methyl C)和 iso-C 3-OH。主要呼吸醌为menaquinone-6(MK-6)。该菌株中检测到的主要极性脂为磷脂酰乙醇胺、一种氨基磷脂、一种未鉴定的氨基脂和一种未鉴定的极性脂。基因组 DNA 的 G+C 含量为 39.7%。菌株 P2-65 与亲缘关系较近的 Flavobacterium 种的平均核苷酸同一性(ANI)和数字 DNA-DNA 杂交(dDDH)值均低于 74.8%和 20%。基于多相特征,菌株 P2-65 被认为代表了 Flavobacterium 属的一个新种,因此提议将其命名为 Flavobacterium inviolabile sp. nov.。模式菌株为 P2-65(=KCTC 62055=NBRC 112953)。

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