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利用极化嵌入模型研究分子环境中的谐波红外和拉曼光谱。

Harmonic Infrared and Raman Spectra in Molecular Environments Using the Polarizable Embedding Model.

机构信息

Hylleraas Centre for Quantum Molecular Sciences, Department of Chemistry, UiT The Arctic University of Norway, N-9037 Tromsø, Norway.

Hylleraas Centre for Quantum Molecular Sciences, Department of Chemistry, University of Oslo, N-0315 Oslo, Norway.

出版信息

J Chem Theory Comput. 2021 Jun 8;17(6):3599-3617. doi: 10.1021/acs.jctc.0c01323. Epub 2021 May 19.

Abstract

We present a fully analytic approach to calculate infrared (IR) and Raman spectra of molecules embedded in complex molecular environments modeled using the fragment-based polarizable embedding (PE) model. We provide the theory for the calculation of analytic second-order geometric derivatives of molecular energies and first-order geometric derivatives of electric dipole moments and dipole-dipole polarizabilities within the PE model. The derivatives are implemented using a general open-ended response theory framework, thus allowing for an extension to higher-order derivatives. The embedding-potential parameters used to describe the environment in the PE model are derived through first-principles calculations, thus allowing a wide variety of systems to be modeled, including solvents, proteins, and other large and complex molecular environments. Here, we present proof-of-principle calculations of IR and Raman spectra of acetone in different solvents. This work is an important step toward calculating accurate vibrational spectra of molecules embedded in realistic environments.

摘要

我们提出了一种完全解析的方法,用于计算嵌入在使用基于片段的极化嵌入 (PE) 模型建模的复杂分子环境中的分子的红外 (IR) 和拉曼光谱。我们提供了在 PE 模型中计算分子能量的二阶几何导数和电偶极矩和偶极子极化率的一阶几何导数的理论。导数使用通用的开放式响应理论框架来实现,从而可以扩展到更高阶导数。用于描述 PE 模型中环境的嵌入势参数是通过第一性原理计算得出的,因此可以对各种系统进行建模,包括溶剂、蛋白质和其他大型复杂分子环境。在这里,我们提出了在不同溶剂中丙酮的 IR 和拉曼光谱的原理验证计算。这项工作是朝着计算嵌入在实际环境中的分子的精确振动光谱迈出的重要一步。

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