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通过分子进化过程提高脂肪酶基因的 mRNA 稳定性和表达水平。

Increased mRNA Stability and Expression Level of Lipase Gene Developed through Molecular Evolution Process.

机构信息

Division of Biotechnology, The Catholic University of Korea, Bucheon 14662, Republic of Korea.

出版信息

J Microbiol Biotechnol. 2021 Jun 28;31(6):882-889. doi: 10.4014/jmb.2103.03011.

Abstract

In order to use an enzyme industrially, it is necessary to increase the activity of the enzyme and optimize the reaction characteristics through molecular evolution techniques. We used the error-prone PCR method to improve the reaction characteristics of LipCA lipase discovered in Antarctic . Recombinant colonies showing large halo zones were selected in tributyrin-containing medium. The lipase activity of one mutant strain (M3-1) was significantly increased, compared to the wild-type (WT) strain. M3-1 strain produced about three times more lipase enzyme than did WT strain. After confirming the nucleotide sequence of the M3-1 gene to be different from that of the WT gene by four bases (73, 381, 756, and 822), the secondary structures of WT and M3-1 mRNA were predicted and compared by RNAfold web program. Compared to the mean free energy (MFE) of WT mRNA, that of M3-1 mRNA was lowered by 4.4 kcal/mol, and the MFE value was significantly lowered by mutations of bases 73 and 756. Site-directed mutagenesis was performed to find out which of the four base mutations actually affected the enzyme expression level. Among them, one mutant enzyme production decreased as WT enzyme production when the base 73 was changed (T→C). These results show that one base change at position 73 can significantly affect protein expression level, and demonstrate that changing the mRNA sequence can increase the stability of mRNA, and can increase the production of foreign protein in .

摘要

为了在工业上使用酶,有必要通过分子进化技术提高酶的活性并优化反应特性。我们使用易错 PCR 方法来改善在南极发现的 LipCA 脂肪酶的反应特性。在含有三丁酸甘油酯的培养基中选择显示大晕圈的重组菌落。与野生型(WT)菌株相比,一种突变株(M3-1)的脂肪酶活性显著提高。M3-1 菌株产生的脂肪酶酶量比 WT 菌株多约三倍。通过易错 PCR 方法对 LipCA 脂肪酶基因进行随机突变,在含有三丁酸甘油酯的平板上筛选到酶活明显提高的突变株 M3-1。通过与野生型基因序列比较,发现突变株 M3-1 的基因序列在第 73、381、756 和 822 位发生了 4 个碱基的突变(73、381、756 和 822 位由 C 突变为 T)。利用 RNAfold 程序预测了 WT 和 M3-1 脂肪酶 mRNA 的二级结构,与 WT 相比,M3-1 的 mRNA 的二级结构自由能(MFE)降低了 4.4 kcal/mol,并且 73 和 756 位碱基突变使 MFE 值显著降低。通过定点突变实验,找到了这 4 个碱基突变中哪些实际上影响了酶的表达水平。其中,当第 73 位碱基由 T 突变为 C 时,突变酶的产量与野生型酶的产量相当。这些结果表明,第 73 位碱基的一个碱基变化可以显著影响蛋白质的表达水平,并且表明改变 mRNA 序列可以提高 mRNA 的稳定性,并可以增加在 中的外源蛋白的产量。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/39d1/9706013/5e3981472105/jmb-31-6-882-f1.jpg

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