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来自牡蛎的证据表明 Pdx 在调节动物胰岛素基因表达方面具有古老的作用。

Evidence from oyster suggests an ancient role for Pdx in regulating insulin gene expression in animals.

机构信息

Department of Zoology, University of Oxford, Oxford, UK.

Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China.

出版信息

Nat Commun. 2021 May 25;12(1):3117. doi: 10.1038/s41467-021-23216-7.

Abstract

Hox and ParaHox genes encode transcription factors with similar expression patterns in divergent animals. The Pdx (Xlox) homeobox gene, for example, is expressed in a sharp spatial domain in the endodermal cell layer of the gut in chordates, echinoderms, annelids and molluscs. The significance of comparable gene expression patterns is unclear because it is not known if downstream transcriptional targets are also conserved. Here, we report evidence indicating that a classic transcriptional target of Pdx1 in vertebrates, the insulin gene, is a likely direct target of Pdx in Pacific oyster adults. We show that one insulin-related gene, cgILP, is co-expressed with cgPdx in oyster digestive tissue. Transcriptomic comparison suggests that this tissue plays a similar role to the vertebrate pancreas. Using ATAC-seq and ChIP, we identify an upstream regulatory element of the cgILP gene which shows binding interaction with cgPdx protein in oyster hepatopancreas and demonstrate, using a cell culture assay, that the oyster Pdx can act as a transcriptional activator through this site, possibly in synergy with NeuroD. These data argue that a classic homeodomain-target gene interaction dates back to the origin of Bilateria.

摘要

Hox 和 ParaHox 基因编码具有相似表达模式的转录因子,在不同的动物中存在。例如,Pdx(Xlox)同源盒基因在脊索动物、棘皮动物、环节动物和软体动物的肠道内胚层细胞层中呈明显的空间域表达。具有可比基因表达模式的意义尚不清楚,因为尚不清楚下游转录靶标是否也保守。在这里,我们报告了证据表明,Pdx1 在脊椎动物中的经典转录靶基因胰岛素基因,可能是太平洋牡蛎成体中 Pdx 的直接靶基因。我们表明,一个与胰岛素相关的基因 cgILP 与牡蛎消化组织中的 cgPdx 共表达。转录组比较表明,该组织在功能上类似于脊椎动物的胰腺。使用 ATAC-seq 和 ChIP,我们鉴定了 cgILP 基因的一个上游调控元件,该元件在牡蛎肝胰腺中与 cgPdx 蛋白具有结合相互作用,并通过细胞培养实验证明,牡蛎 Pdx 可以通过该位点作为转录激活因子发挥作用,可能与 NeuroD 协同作用。这些数据表明,经典同源盒靶基因相互作用可以追溯到两侧对称动物的起源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01d8/8149454/cd4ea9203bcd/41467_2021_23216_Fig1_HTML.jpg

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