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HIV-1 亚型 C 在巴西东北部的动态扩散。

Dynamic Dispersion of HIV-1 Subtype C Toward Brazilian Northeastern Region.

机构信息

Núcleo de Bioinformática, Departamento de Bioquímica e Biofísica, Universidade Federal da Bahia, Salvador, Brazil.

Instituto Gonçalo Moniz, Fundação Oswaldo Cruz-FIOCRUZ, Salvador, Brazil.

出版信息

AIDS Res Hum Retroviruses. 2021 Dec;37(12):913-921. doi: 10.1089/AID.2020.0308. Epub 2021 Jul 21.

Abstract

The subtype C accounts for >50% of HIV type 1 (HIV-1) infections worldwide and it is currently the predominant viral form in South Brazil. Subtype C has been reported in all Brazilian regions; however, the phylogenetic relationship among strains circulating in those regions still remains unclear. This study aimed to investigate the origin and dynamic dispersion of HIV-1 subtype C toward Northeast Brazil. Our phylogenetic analysis suggests that most subtype C strains circulating in Brazil (99%) are descendant from the main lineage whose entrance in the country was previously described in the 1970s. According to the literature, additional introductions of subtype C were reported in the country through the Southeast region and in this study we identified another entry event that occurred most likely through the North region. Furthermore, our analysis suggests that the spread of subtype C to Brazilian Northeastern states occurred through multiple independent introductions of the main lineage that originated in South Brazil between mid-1980s and late 1990s. Despite the observation of eventual new HIV-1 subtype C introductions, our results highlight the predominance of a single lineage of this subtype in Brazil and the importance of South region in its dissemination throughout the country.

摘要

C 亚型占全球超过 50%的 1 型人类免疫缺陷病毒(HIV-1)感染,目前也是南巴西南部的主要病毒形式。C 亚型已在巴西所有地区报告,但在这些地区流行的毒株之间的系统发育关系仍不清楚。本研究旨在调查 HIV-1 C 亚型向巴西北部的起源和动态传播。我们的系统发育分析表明,巴西流行的大多数 C 亚型毒株(99%)是主要谱系的后代,该谱系于 20 世纪 70 年代首次进入该国。根据文献报道,C 亚型的其他传入事件是通过东南部进入该国的,在本研究中,我们发现了另一个可能通过北部进入的事件。此外,我们的分析表明,C 亚型向巴西东北部各州的传播是通过起源于南巴西南部的主要谱系的多次独立传入事件发生的,这些传入事件发生在 20 世纪 80 年代中期至 90 年代后期。尽管观察到 HIV-1 C 亚型的新传入,但我们的结果强调了该亚型在巴西的单一谱系占主导地位,以及南部地区在其在全国传播中的重要性。

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