Nazarian Alireza, Kulminski Alexander M
Biodemography of Aging Research Unit, Social Science Research Institute, Duke University, Durham, NC 27705, USA.
Genes (Basel). 2021 May 1;12(5):686. doi: 10.3390/genes12050686.
Almost all complex disorders have manifested epidemiological and clinical sex disparities which might partially arise from sex-specific genetic mechanisms. Addressing such differences can be important from a precision medicine perspective which aims to make medical interventions more personalized and effective. We investigated sex-specific genetic associations with colorectal (CRCa) and lung (LCa) cancers using genome-wide single-nucleotide polymorphisms (SNPs) data from three independent datasets. The genome-wide association analyses revealed that 33 SNPs were associated with CRCa/LCa at < 5.0 × 10 neither males or females. Of these, 26 SNPs had sex-specific effects as their effect sizes were statistically different between the two sexes at a Bonferroni-adjusted significance level of 0.0015. None had proxy SNPs within their ±1 Mb regions and the closest genes to 32 SNPs were not previously associated with the corresponding cancers. The pathway enrichment analyses demonstrated the associations of 35 pathways with CRCa or LCa which were mostly implicated in immune system responses, cell cycle, and chromosome stability. The significant pathways were mostly enriched in either males or females. Our findings provided novel insights into the potential sex-specific genetic heterogeneity of CRCa and LCa at SNP and pathway levels.
几乎所有复杂疾病都表现出流行病学和临床方面的性别差异,这可能部分源于性别特异性的遗传机制。从精准医学的角度来看,解决这些差异可能很重要,精准医学旨在使医疗干预更加个性化和有效。我们使用来自三个独立数据集的全基因组单核苷酸多态性(SNP)数据,研究了与结直肠癌(CRCa)和肺癌(LCa)的性别特异性遗传关联。全基因组关联分析显示,在<5.0×10时,有33个SNP与CRCa/LCa相关,男性和女性均如此。其中,26个SNP具有性别特异性效应,因为在Bonferroni校正的显著性水平为0.0015时,它们在两性之间的效应大小在统计学上不同。在其±1 Mb区域内没有代理SNP,并且与32个SNP最接近的基因以前未与相应癌症相关联。通路富集分析表明35条通路与CRCa或LCa相关,这些通路大多与免疫系统反应、细胞周期和染色体稳定性有关。显著的通路大多在男性或女性中富集。我们的研究结果为CRCa和LCa在SNP和通路水平上潜在的性别特异性遗传异质性提供了新的见解。