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利用环介导等温扩增(LAMP)法快速检测(布莱克曼)(鞘翅目,象甲科)

Rapid Detection of (Blackman) (Coleoptera, Curculionidae) with the Loop-Mediated Isothermal Amplification (LAMP) Method.

作者信息

Rizzo Domenico, Moricca Salvatore, Bracalini Matteo, Benigno Alessandra, Bernardo Umberto, Luchi Nicola, Da Lio Daniele, Nugnes Francesco, Cappellini Giovanni, Salemi Chiara, Cacciola Santa Olga, Panzavolta Tiziana

机构信息

Laboratory of Phytopathological Diagnostics and Molecular Biology, Plant Protection Service of Tuscany, Via Ciliegiole 99, 51100 Pistoia, Italy.

Department of Agricultural, Food, Environmental and Forestry Science and Technology (DAGRI), Plant Pathology and Entomology Section, University of Florence, Piazzale delle Cascine 28, 50144 Florence, Italy.

出版信息

Plants (Basel). 2021 May 22;10(6):1048. doi: 10.3390/plants10061048.

DOI:10.3390/plants10061048
PMID:34067342
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8224600/
Abstract

The walnut twig beetle is a phloem-boring bark beetle responsible, in association with the ascomycete , for the Thousand Cankers Disease (TCD) of walnut trees. The recent finding of TCD in Europe prompted the development of effective diagnostic protocols for the early detection of members of this insect/fungus complex. Here we report the development of a highly efficient, low-cost, and rapid method for detecting the beetle, or even just its biological traces, from environmental samples: the loop-mediated isothermal amplification (LAMP) assay. The method, designed on the 28S ribosomal RNA gene, showed high specificity and sensitivity, with no cross reactivity to other bark beetles and wood-boring insects. The test was successful even with very small amounts of the target insect's nucleic acid, with limit values of 0.64 pg/µL and 3.2 pg/µL for WTB adults and frass, respectively. A comparison of the method (both in real time and visual) with conventional PCR did not display significant differences in terms of LoD. This LAMP protocol will enable quick, low-cost, and early detection of in areas with new infestations and for phytosanitary inspections at vulnerable sites (e.g., seaports, airports, loading stations, storage facilities, and wood processing companies).

摘要

核桃小蠹是一种蛀食韧皮部的小蠹虫,它与子囊菌共同引发核桃树的千疮病(TCD)。近期在欧洲发现千疮病促使人们开发出有效的诊断方案,用于早期检测这种昆虫/真菌复合体的成员。在此,我们报告一种高效、低成本且快速的方法,用于从环境样本中检测这种小蠹虫,甚至仅仅是其生物痕迹:环介导等温扩增(LAMP)检测法。该方法基于28S核糖体RNA基因设计,具有高度特异性和敏感性,对其他小蠹虫和蛀木昆虫无交叉反应。即使使用极少量目标昆虫的核酸进行检测也能成功,对于核桃小蠹成虫和粪便,其极限值分别为0.64 pg/µL和3.2 pg/µL。将该方法(实时和可视化)与传统PCR进行比较,在检测限方面未显示出显著差异。这种LAMP检测方案将能够在新发生虫害的地区快速、低成本且早期地检测到核桃小蠹,并用于在易受侵害地点(如海港、机场、装卸站、储存设施和木材加工公司)进行植物检疫检查。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/b430de581a0c/plants-10-01048-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/8761453f61e6/plants-10-01048-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/688d4db876dd/plants-10-01048-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/d252943106c4/plants-10-01048-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/c74dc5b3b7e6/plants-10-01048-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/8404b212bda7/plants-10-01048-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/d30bbcec9be3/plants-10-01048-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/b0d72f0bd7a5/plants-10-01048-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/b430de581a0c/plants-10-01048-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/8761453f61e6/plants-10-01048-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/688d4db876dd/plants-10-01048-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/d252943106c4/plants-10-01048-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/c74dc5b3b7e6/plants-10-01048-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/8404b212bda7/plants-10-01048-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/d30bbcec9be3/plants-10-01048-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/b0d72f0bd7a5/plants-10-01048-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6110/8224600/b430de581a0c/plants-10-01048-g008.jpg

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