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在第i、i + 1位通过碳氢化合物钉扎稳定的α-螺旋肽的X射线晶体学结构

X-ray Crystallographic Structure of α-Helical Peptide Stabilized by Hydrocarbon Stapling at , + 1 Positions.

作者信息

Makura Yui, Ueda Atsushi, Kato Takuma, Iyoshi Akihiro, Higuchi Mei, Doi Mitsunobu, Tanaka Masakazu

机构信息

Graduate School of Biomedical Sciences, Nagasaki University, 1-14 Bunkyo-machi, Nagasaki 852-8521, Japan.

Faculty of Pharmacy, Osaka Medical and Pharmaceutical University, Osaka 569-1094, Japan.

出版信息

Int J Mol Sci. 2021 May 19;22(10):5364. doi: 10.3390/ijms22105364.

Abstract

Hydrocarbon stapling is a useful tool for stabilizing the secondary structure of peptides. Among several methods, hydrocarbon stapling at , + 1 positions was not extensively studied, and their secondary structures are not clarified. In this study, we investigate , + 1 hydrocarbon stapling between -4-allyloxy-l-proline and various olefin-tethered amino acids. Depending on the ring size of the stapled side chains and structure of the olefin-tethered amino acids, or -selectivities were observed during the ring-closing metathesis reaction (/ was up to 8.5:1 for 17-14-membered rings and up to 1:20 for 13-membered rings). We performed X-ray crystallographic analysis of hydrocarbon stapled peptide at , + 1 positions. The X-ray crystallographic structure suggested that the , + 1 staple stabilizes the peptide secondary structure to the right-handed α-helix. These findings are especially important for short oligopeptides because the employed stapling method uses two minimal amino acid residues adjacent to each other.

摘要

烃基环化修饰是稳定肽二级结构的一种有用工具。在几种方法中,在i,i + 1位置的烃基环化修饰尚未得到广泛研究,其二级结构也未阐明。在本研究中,我们研究了-4-烯丙氧基-L-脯氨酸与各种烯烃连接的氨基酸之间的i,i + 1烃基环化修饰。根据环化侧链的环大小和烯烃连接的氨基酸的结构,在关环复分解反应中观察到了Z或E选择性(对于17 - 14元环,Z/E高达8.5:1,对于13元环高达1:20)。我们对i,i + 1位置的烃基环化修饰肽进行了X射线晶体学分析。X射线晶体学结构表明,i,i + 1环化修饰将肽二级结构稳定为右手α-螺旋。这些发现对于短寡肽尤为重要,因为所采用的环化修饰方法使用了彼此相邻的两个最小氨基酸残基。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b73/8160927/da84d1f4051a/ijms-22-05364-g001.jpg

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