Department of Chemistry, Chung Yuan Christian University, Chung-Li 320314, Taiwan.
Department of Bioscience Technology, Chung Yuan Christian University, Chung-Li 320314, Taiwan.
Int J Mol Sci. 2021 May 26;22(11):5686. doi: 10.3390/ijms22115686.
Recently, medaka has been used as a model organism in various research fields. However, even though it possesses several advantages over zebrafish, fewer studies were done in medaka compared to zebrafish, especially with regard to its behavior. Thus, to provide more information regarding its behavior and to demonstrate the behavioral differences between several species of medaka, we compared the behavioral performance and biomarker expression in the brain between four medaka fishes, , , , and . We found that each medaka species explicitly exhibited different behaviors to each other, which might be related to the different basal levels of several biomarkers. Furthermore, by phenomics and genomic-based clustering, the differences between these medaka fishes were further investigated. Here, the phenomic-based clustering was based on the behavior results, while the genomic-based clustering was based on the sequence of the gene. As we expected, both clusterings showed some resemblances to each other in terms of the interspecies relationship between medaka and zebrafish. However, this similarity was not displayed by both clusterings in the medaka interspecies comparisons. Therefore, these results suggest a re-interpretation of several prior studies in comparative biology. We hope that these results contribute to the growing database of medaka fish phenotypes and provide one of the foundations for future phenomics studies of medaka fish.
最近,青鳉已被广泛应用于多个研究领域的模式生物。然而,尽管它相对于斑马鱼具有许多优势,但与斑马鱼相比,针对青鳉的研究较少,尤其是在行为方面。因此,为了提供更多关于其行为的信息,并展示几种青鳉鱼类之间的行为差异,我们比较了四种青鳉鱼类( , , ,和 )之间的行为表现和大脑中的生物标志物表达。我们发现,每种青鳉鱼类彼此之间都表现出明显不同的行为,这可能与几种生物标志物的基础水平不同有关。此外,我们还通过表型组学和基于基因组的聚类进一步研究了这些青鳉鱼类之间的差异。在这里,表型组学聚类是基于行为结果的,而基于基因组的聚类则是基于 基因的序列。正如我们所预期的那样,这两种聚类在青鳉与斑马鱼之间的种间关系方面都有一些相似之处。然而,在青鳉种间比较中,这两种聚类并没有显示出相似性。因此,这些结果提示我们需要重新解释比较生物学中的一些先前的研究。我们希望这些结果能够为青鳉鱼类表型的不断增长的数据库做出贡献,并为未来的青鳉鱼类表型组学研究提供基础之一。