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从光氧电压核心通过 aureochrome-1 的β-折叠表面疏水区传输光信号。

Transmission of light signals from the light-oxygen-voltage core via the hydrophobic region of the β-sheet surface in aureochrome-1.

机构信息

Department of Earth and Space Science, Graduate School of Science, Osaka University, Toyonaka, Osaka, 560-0043, Japan.

出版信息

Sci Rep. 2021 Jun 7;11(1):11995. doi: 10.1038/s41598-021-91497-5.

DOI:10.1038/s41598-021-91497-5
PMID:34099847
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8184817/
Abstract

Light-Oxygen-Voltage (LOV) domains are responsible for detecting blue light (BL) and regulating the activities of effector domains in various organisms. Photozipper (PZ), an N-terminally truncated aureochrome-1 protein, contains a LOV domain and a basic leucin zipper (bZIP) domain and plays a role as a light-activatable transcription factor. PZ is monomeric in the dark state and undergoes non-covalent dimerization upon illumination with BL, subsequently increasing its affinity for the target DNA. To clarify the molecular mechanism of aureochromes, we prepared site-directed mutants of PZ and performed quantitative analyses in the dark and light states. Although the amino acid substitutions in the hinge region between the LOV core and A'α helix had minor effects on the dimerization and DNA-binding properties of PZ, the substitutions in the β-sheet region of the LOV core and in the A'α helix significantly affected these properties. We found that light signals are transmitted from the LOV core to the effector bZIP domain via the hydrophobic residues on the β-sheet. The light-induced conformational change possibly deforms the hydrophobic regions of the LOV core and induces the detachment of the A'α helix to expose the dimerization surface, likely activating the bZIP domain in a light-dependent manner.

摘要

光氧电压(LOV)结构域负责检测蓝光(BL)并调节各种生物体中效应结构域的活性。Photozipper(PZ)是一种 N 端截断的 aureochrome-1 蛋白,包含一个 LOV 结构域和一个碱性亮氨酸拉链(bZIP)结构域,作为一种光激活转录因子发挥作用。PZ 在黑暗状态下是单体,在受到 BL 照射时会发生非共价二聚化,随后增加其与靶 DNA 的亲和力。为了阐明 aureochrome 的分子机制,我们制备了 PZ 的定点突变体,并在黑暗和光照状态下进行了定量分析。尽管 LOV 核心和 A'α 螺旋之间铰链区域的氨基酸取代对 PZ 的二聚化和 DNA 结合特性的影响较小,但 LOV 核心的β-折叠区域和 A'α 螺旋中的氨基酸取代对这些特性有显著影响。我们发现,光信号通过β-折叠上的疏水残基从 LOV 核心传递到效应 bZIP 结构域。光诱导的构象变化可能会使 LOV 核心的疏水区域变形,并导致 A'α 螺旋脱离,暴露二聚化表面,可能以光依赖的方式激活 bZIP 结构域。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/d30fe32f27d8/41598_2021_91497_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/c7e5a87fc867/41598_2021_91497_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/ab9b4b32acbb/41598_2021_91497_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/4c3a81ac96c4/41598_2021_91497_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/b1ab12d7c076/41598_2021_91497_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/dccac53b15c6/41598_2021_91497_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/2446a06fe98f/41598_2021_91497_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/d30fe32f27d8/41598_2021_91497_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/c7e5a87fc867/41598_2021_91497_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/ab9b4b32acbb/41598_2021_91497_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/4c3a81ac96c4/41598_2021_91497_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/b1ab12d7c076/41598_2021_91497_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/dccac53b15c6/41598_2021_91497_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/2446a06fe98f/41598_2021_91497_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37fd/8184817/d30fe32f27d8/41598_2021_91497_Fig7_HTML.jpg

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本文引用的文献

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J Phys Chem B. 2020 Oct 15;124(41):8960-8972. doi: 10.1021/acs.jpcb.0c05842. Epub 2020 Oct 1.
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Molecular Mechanism of Light-Induced Conformational Switching of the LOV Domain in Aureochrome-1.金藻视蛋白-1中光诱导LOV结构域构象转换的分子机制
Biochemistry. 2020 Jul 21;59(28):2592-2601. doi: 10.1021/acs.biochem.0c00271. Epub 2020 Jun 29.
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A Noncanonical Chromophore Reveals Structural Rearrangements of the Light-Oxygen-Voltage Domain upon Photoactivation.
非经典生色团揭示光-氧-电压结构域在光激活时的结构重排。
Biochemistry. 2019 Jun 4;58(22):2608-2616. doi: 10.1021/acs.biochem.9b00255. Epub 2019 May 17.
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Target Sequence Recognition by a Light-Activatable Basic Leucine Zipper Factor, Photozipper.光激活碱性亮氨酸拉链因子(光拉链)对靶序列的识别
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Quantitative analyses of the equilibria among DNA complexes of a blue-light-regulated bZIP module, Photozipper.蓝光调节的bZIP模块“光拉链”的DNA复合物之间平衡的定量分析
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Glutamine Amide Flip Elicits Long Distance Allosteric Responses in the LOV Protein Vivid.谷氨酰胺酰胺翻转在 LOV 蛋白 Vivid 中引发远距离变构反应。
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Signaling States of a Short Blue-Light Photoreceptor Protein PpSB1-LOV Revealed from Crystal Structures and Solution NMR Spectroscopy.从晶体结构和溶液核磁共振光谱揭示的短蓝光光感受器蛋白PpSB1-LOV的信号状态
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