Department of Cardiology, Tianjin Union Medical Center; Tianjin-China.
Anatol J Cardiol. 2021 Jun;25(6):429-436. doi: 10.14744/AnatolJCardiol.2020.41625.
This study investigated the potential microRNAs (miRNAs) having a diagnostic value in atrial fibrillation (AF).
The miRNA and mRNA expression profiles of atrial tissue from healthy individuals and patients with AF were downloaded from the Gene Expression Omnibus database. Differentially expressed miRNAs/mRNAs (DEMis/DEMs) were identified in patients with AF. Furthermore, an interaction network between DEMis and DMEs was constructed. The biological processes, molecular functions, and signaling pathways of DEMs were enriched. Then, the diagnostic values of candidate DECs among healthy individuals and patients with AF were preliminarily evaluated in the GSE101586, GSEE101684, and GSE112214 datasets.
Twenty DEMis were identified in patients with AF, including seven upregulated and 13 downregulated DEMis. Furthermore, 2,307 DEMs were identified in patients with AF. In the DEMi-DEM interaction network, downregulated miR-193b and upregulated miR-16 interacted with the most targeted DEMs, which interacted with 72 and 65 targeted DEMs, respectively. The targeted DEMs were significantly enriched in biological functions including apoptosis and the PI3K-Akt, mTOR, Hippo, HIF-1, and ErbB signaling pathways. Four of the 20 DEMis (i.e., miR-490-3p, miR-630, miR-146b-5p, and miR-367) had a potential value to distinguish patients with AF from healthy individuals in the GSE68475, GSE70887, and GSE28954 datasets. The area under the curve values for those four DEMis were 0.751, 0.719, 0.709, and 0.7, respectively.
DEMis might play key roles in AF progression through the mTOR and Hippo signaling pathways. miR-409-3p, miR-630, miR-146b-5p, and miR-367 had a potential diagnostic value to discriminate patients with AF from healthy controls in this study.
本研究旨在探讨在心房颤动(AF)中具有诊断价值的潜在 microRNAs(miRNAs)。
从基因表达综合数据库中下载了健康个体和 AF 患者的心房组织的 miRNA 和 mRNA 表达谱。在 AF 患者中鉴定差异表达的 miRNAs/mRNAs(DEMis/DEMs)。此外,构建了 DEMis 和 DMEs 之间的相互作用网络。对 DMEs 的生物过程、分子功能和信号通路进行了富集。然后,在 GSE101586、GSEE101684 和 GSE112214 数据集初步评估了候选 DECs 在健康个体和 AF 患者中的诊断价值。
在 AF 患者中鉴定出 20 个 DEMis,包括 7 个上调和 13 个下调的 DEMis。此外,在 AF 患者中还鉴定出 2307 个 DEMs。在 DEMi-DEM 相互作用网络中,下调的 miR-193b 和上调的 miR-16 分别与最多靶向的 DEMs 相互作用,与分别与 72 和 65 个靶向 DEMs 相互作用。靶向的 DEMs 在包括凋亡和 PI3K-Akt、mTOR、Hippo、HIF-1 和 ErbB 信号通路在内的生物学功能中显著富集。在 GSE68475、GSE70887 和 GSE28954 数据集,20 个 DEMis 中的 4 个(miR-490-3p、miR-630、miR-146b-5p 和 miR-367)具有区分 AF 患者与健康个体的潜在价值。这四个 DEMis 的曲线下面积值分别为 0.751、0.719、0.709 和 0.7。
DEMis 通过 mTOR 和 Hippo 信号通路可能在 AF 进展中发挥关键作用。miR-409-3p、miR-630、miR-146b-5p 和 miR-367 在本研究中具有区分 AF 患者与健康对照的潜在诊断价值。