College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, China.
Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), College of Pharmacy, Harbin Medical University, Harbin, China.
Cell Death Dis. 2021 Jun 10;12(6):600. doi: 10.1038/s41419-021-03884-5.
Long non-coding RNAs (lncRNAs) have emerged as critical factors for regulating multiple biological processes during organ fibrosis. However, the mechanism of lncRNAs in idiopathic pulmonary fibrosis (IPF) remains incompletely understood. In the present study, two sets of lncRNAs were defined: IPF pathogenic lncRNAs and IPF progression lncRNAs. IPF pathogenic and progression lncRNAs-mRNAs co-expression networks were constructed to identify essential lncRNAs. Network analysis revealed a key lncRNA CTD-2528L19.6, which was up-regulated in early-stage IPF compared to normal lung tissue, and subsequently down-regulated during advanced-stage IPF. CTD-2528L19.6 was indicated to regulate fibroblast activation in IPF progression by mediating the expression of fibrosis related genes LRRC8C, DDIT4, THBS1, S100A8 and TLR7 et al. Further studies showed that silencing of CTD-2528L19.6 increases the expression of Fn1 and Collagen I both at mRNA and protein levels, promoted the transition of fibroblasts into myofibroblasts and accelerated the migration and proliferation of MRC-5 cells. In contrast, CTD-2528L19.6 overexpression alleviated fibroblast activation in MRC-5 cells induced by TGF-β1. LncRNA CTD-2528L19.6 inhibited fibroblast activation through regulating the expression of LRRC8C in vitro assays. Our results suggest that CTD-2528L19.6 may prevent the progression of IPF from early-stage and alleviate fibroblast activation during the advanced-stage of IPF. Thus, exploring the regulatory effect of lncRNA CTD-2528L19.6 may provide new sights for the prevention and treatment of IPF.
长链非编码 RNA(lncRNA)已成为调节器官纤维化过程中多种生物学过程的关键因素。然而,lncRNA 在特发性肺纤维化(IPF)中的作用机制尚不完全清楚。本研究定义了两组 lncRNA:IPF 致病 lncRNA 和 IPF 进展 lncRNA。构建了 IPF 致病和进展 lncRNA-mRNA 共表达网络,以鉴定关键 lncRNA。网络分析揭示了关键的 lncRNA CTD-2528L19.6,其在早期 IPF 中与正常肺组织相比上调,随后在晚期 IPF 中下调。CTD-2528L19.6 被表明通过调节纤维化相关基因 LRRC8C、DDIT4、THBS1、S100A8 和 TLR7 等的表达,在 IPF 进展中调节成纤维细胞的激活。进一步的研究表明,沉默 CTD-2528L19.6 可增加 Fn1 和 Collagen I 在 mRNA 和蛋白水平上的表达,促进成纤维细胞向肌成纤维细胞的转化,并加速 MRC-5 细胞的迁移和增殖。相反,CTD-2528L19.6 过表达可减轻 TGF-β1 诱导的 MRC-5 细胞中成纤维细胞的激活。CTD-2528L19.6 通过体外试验调节 LRRC8C 的表达抑制成纤维细胞的激活。我们的研究结果表明,CTD-2528L19.6 可能阻止 IPF 从早期进展,并在 IPF 的晚期减轻成纤维细胞的激活。因此,探索 lncRNA CTD-2528L19.6 的调节作用可能为 IPF 的防治提供新的思路。