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解析癌症 DNA 甲基化图谱。

Navigating the DNA methylation landscape of cancer.

机构信息

Division of Cancer Cell Biology, Institute of Medical Science, University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639, Japan.

出版信息

Trends Genet. 2021 Nov;37(11):1012-1027. doi: 10.1016/j.tig.2021.05.002. Epub 2021 Jun 10.

DOI:10.1016/j.tig.2021.05.002
PMID:34120771
Abstract

DNA methylation is a chemical modification that defines cell type and lineage through the control of gene expression and genome stability. Disruption of DNA methylation control mechanisms causes a variety of diseases, including cancer. Cancer cells are characterized by aberrant DNA methylation (i.e., genome-wide hypomethylation and site-specific hypermethylation), mainly targeting CpG islands in gene expression regulatory elements. In particular, the early findings that a variety of tumor suppressor genes (TSGs) are targets of DNA hypermethylation in cancer led to the proposal of a model in which aberrant DNA methylation promotes cellular oncogenesis through TSGs silencing. However, recent genome-wide analyses have revealed that this classical model needs to be reconsidered. In this review, we will discuss the molecular mechanisms of DNA methylation abnormalities in cancer as well as their therapeutic potential.

摘要

DNA 甲基化是一种化学修饰,通过控制基因表达和基因组稳定性来定义细胞类型和谱系。DNA 甲基化控制机制的破坏会导致多种疾病,包括癌症。癌细胞的特征是异常的 DNA 甲基化(即全基因组低甲基化和特定位点高甲基化),主要针对基因表达调控元件中的 CpG 岛。特别是,早期发现多种肿瘤抑制基因(TSGs)是癌症中 DNA 高甲基化的靶标,这导致了一种模型的提出,即异常的 DNA 甲基化通过 TSGs 的沉默促进细胞癌发生。然而,最近的全基因组分析表明,这一经典模型需要重新考虑。在这篇综述中,我们将讨论癌症中 DNA 甲基化异常的分子机制及其治疗潜力。

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1
Navigating the DNA methylation landscape of cancer.解析癌症 DNA 甲基化图谱。
Trends Genet. 2021 Nov;37(11):1012-1027. doi: 10.1016/j.tig.2021.05.002. Epub 2021 Jun 10.
2
Methyl-CpG-binding protein MBD2 plays a key role in maintenance and spread of DNA methylation at CpG islands and shores in cancer.甲基化CpG结合蛋白MBD2在癌症中CpG岛和海岸区域DNA甲基化的维持与扩散过程中发挥关键作用。
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Comparison of genome-wide analysis techniques to DNA methylation analysis in human cancer.比较全基因组分析技术与人类癌症中的 DNA 甲基化分析。
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Genomic insights into cancer-associated aberrant CpG island hypermethylation.癌症相关异常 CpG 岛过度甲基化的基因组见解。
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DNA methylation aberrancies as a guide for surveillance and treatment of human cancers.DNA甲基化异常作为人类癌症监测和治疗的指导
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A multifactorial signature of DNA sequence and polycomb binding predicts aberrant CpG island methylation.DNA序列和多梳蛋白结合的多因素特征可预测异常的CpG岛甲基化。
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The study of aberrant methylation in cancer via restriction landmark genomic scanning.通过限制性内切酶位点基因组扫描对癌症中异常甲基化的研究。
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Re-expression of methylation-induced tumor suppressor gene silencing is associated with the state of histone modification in gastric cancer cell lines.甲基化诱导的肿瘤抑制基因沉默的重新表达与胃癌细胞系中的组蛋白修饰状态相关。
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Predicting aberrant CpG island methylation.预测异常的CpG岛甲基化。
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