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变构网络中涉及的表面暴露残基的替换增强了细胞中色氨酸合酶的功能。

Substitution of a Surface-Exposed Residue Involved in an Allosteric Network Enhances Tryptophan Synthase Function in Cells.

作者信息

D'Amico Rebecca N, Bosken Yuliana K, O'Rourke Kathleen F, Murray Alec M, Admasu Woudasie, Chang Chia-En A, Boehr David D

机构信息

Department of Chemistry, The Pennsylvania State University, University Park, PA, United States.

Department of Chemistry, The University of California Riverside, Riverside, CA, United States.

出版信息

Front Mol Biosci. 2021 May 26;8:679915. doi: 10.3389/fmolb.2021.679915. eCollection 2021.

Abstract

Networks of noncovalent amino acid interactions propagate allosteric signals throughout proteins. Tryptophan synthase (TS) is an allosterically controlled bienzyme in which the indole product of the alpha subunit (αTS) is transferred through a 25 Å hydrophobic tunnel to the active site of the beta subunit (βTS). Previous nuclear magnetic resonance and molecular dynamics simulations identified allosteric networks in αTS important for its function. We show here that substitution of a distant, surface-exposed network residue in αTS enhances tryptophan production, not by activating αTS function, but through dynamically controlling the opening of the indole channel and stimulating βTS activity. While stimulation is modest, the substitution also enhances cell growth in a tryptophan-auxotrophic strain of compared to complementation with wild-type αTS, emphasizing the biological importance of the network. Surface-exposed networks provide new opportunities in allosteric drug design and protein engineering, and hint at potential information conduits through which the functions of a metabolon or even larger proteome might be coordinated and regulated.

摘要

非共价氨基酸相互作用网络在蛋白质中传递变构信号。色氨酸合酶(TS)是一种变构调控的双酶,其中α亚基(αTS)的吲哚产物通过一条25埃的疏水通道转移到β亚基(βTS)的活性位点。先前的核磁共振和分子动力学模拟确定了αTS中对其功能重要的变构网络。我们在此表明,αTS中一个位于远处、暴露于表面的网络残基的取代增强了色氨酸的产生,不是通过激活αTS的功能,而是通过动态控制吲哚通道的开放并刺激βTS的活性。虽然刺激作用适度,但与野生型αTS互补相比,该取代也增强了色氨酸营养缺陷型菌株的细胞生长,强调了该网络的生物学重要性。暴露于表面的网络在变构药物设计和蛋白质工程中提供了新的机会,并暗示了潜在的信息传导途径,通过这些途径,代谢子甚至更大的蛋白质组的功能可能得到协调和调控。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a90/8187860/a1d3f46922ad/fmolb-08-679915-g001.jpg

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