Khalil Reem, Farhat Ahmad, Dłotko Paweł
Biology, Chemistry, and Environmental Sciences Department, American University of Sharjah, Sharjah, United Arab Emirates.
Dioscuri Centre in Topological Data Analysis, Mathematical Institute, Polish Academy of Sciences, Warsaw, Poland.
Front Comput Neurosci. 2021 May 31;15:667696. doi: 10.3389/fncom.2021.667696. eCollection 2021.
Neuronal morphology is characterized by salient features such as complex axonal and dendritic arbors. In the mammalian brain, variations in dendritic morphology among cell classes, brain regions, and animal species are thought to underlie known differences in neuronal function. In this work, we obtained a large dataset from http://neuromorpho.org/ comprising layer III pyramidal cells in different cortical areas of the ventral visual pathway (V1, V2, V4, TEO, and TE) of the macaque monkey at different developmental stages. We performed an in depth quantitative analysis of pyramidal cell morphology throughout development in an effort to determine which aspects mature early in development and which features require a protracted period of maturation. We were also interested in establishing if developmental changes in morphological features occur simultaneously or hierarchically in multiple visual cortical areas. We addressed these questions by performing principal component analysis (PCA) and hierarchical clustering analysis on relevant morphological features. Our analysis indicates that the maturation of pyramidal cell morphology is largely based on early development of topological features in most visual cortical areas. Moreover, the maturation of pyramidal cell morphology in V1, V2, V4, TEO, and TE is characterized by unique developmental trajectories.
神经元形态具有显著特征,如复杂的轴突和树突分支。在哺乳动物大脑中,不同细胞类型、脑区和动物物种之间树突形态的差异被认为是神经元功能已知差异的基础。在这项工作中,我们从http://neuromorpho.org/获取了一个大型数据集,该数据集包含猕猴腹侧视觉通路(V1、V2、V4、TEO和TE)不同皮质区域在不同发育阶段的III层锥体细胞。我们对整个发育过程中的锥体细胞形态进行了深入的定量分析,以确定哪些方面在发育早期成熟,哪些特征需要较长时间的成熟。我们还感兴趣于确定形态特征的发育变化在多个视觉皮质区域是同时发生还是分层发生。我们通过对相关形态特征进行主成分分析(PCA)和层次聚类分析来解决这些问题。我们的分析表明,在大多数视觉皮质区域,锥体细胞形态的成熟主要基于拓扑特征的早期发育。此外,V1、V2、V4、TEO和TE中锥体细胞形态的成熟具有独特的发育轨迹。