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GAT-2 缺乏对小鼠初始 T 细胞向 Th1 细胞分化影响的转录组分析

Transcriptomic Analysis of the Effect of GAT-2 Deficiency on Differentiation of Mice Naïve T Cells Into Th1 Cells .

机构信息

College of Veterinary Medicine, Yangzhou University, Yangzhou, China.

Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University, Yangzhou, China.

出版信息

Front Immunol. 2021 Jun 2;12:667136. doi: 10.3389/fimmu.2021.667136. eCollection 2021.

DOI:10.3389/fimmu.2021.667136
PMID:34149704
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8208808/
Abstract

The neurotransmitter γ-aminobutyric acid (GABA) is known to affect the activation and function of immune cells. This study investigated the role of GABA transporter (GAT)-2 in the differentiation of type 1 helper T (Th1) cells. Naïve CD4 T cells isolated from splenocytes of GAT-2 knockout (KO) and wild-type (WT) mice were cultured; Th1 cell differentiation was induced and transcriptome and bioinformatics analyses were carried out. We found that GAT-2 deficiency promoted the differentiation of naïve T cells into Th1 cells. RNA sequencing revealed 2984 differentially expressed genes including 1616 that were up-regulated and 1368 that were down-regulated in GAT-2 KO cells compared to WT cells, which were associated with 950 enriched Gene Ontology terms and 33 enriched Kyoto Encyclopedia of Genes and Genomes pathways. Notably, 4 signal transduction pathways (hypoxia-inducible factor [HIF]-1, Hippo, phospholipase D, and Janus kinase [JAK]/signal transducer and activator of transcription [STAT]) and one metabolic pathway (glycolysis/gluconeogenesis) were significantly enriched by GAT-2 deficiency, suggesting that these pathways mediate the effect of GABA on T cell differentiation. Our results provide evidence for the immunomodulatory function of GABA signaling in T cell-mediated immunity and can guide future studies on the etiology and management of autoimmune diseases.

摘要

神经递质 γ-氨基丁酸(GABA)已知会影响免疫细胞的激活和功能。本研究探讨了 GABA 转运蛋白(GAT)-2 在 1 型辅助 T(Th1)细胞分化中的作用。从 GAT-2 敲除(KO)和野生型(WT)小鼠脾细胞中分离出幼稚 CD4 T 细胞进行培养;诱导 Th1 细胞分化,并进行转录组和生物信息学分析。我们发现 GAT-2 缺乏促进了幼稚 T 细胞向 Th1 细胞的分化。RNA 测序显示,与 WT 细胞相比,GAT-2 KO 细胞中有 2984 个差异表达基因,包括 1616 个上调基因和 1368 个下调基因,这些基因与 950 个富集的基因本体术语和 33 个富集的京都基因与基因组百科全书途径相关。值得注意的是,4 个信号转导途径(缺氧诱导因子 [HIF]-1、 Hippo、磷脂酶 D 和 Janus 激酶 [JAK]/信号转导和转录激活因子 [STAT])和一个代谢途径(糖酵解/糖异生)被 GAT-2 缺乏显著富集,表明这些途径介导了 GABA 对 T 细胞分化的影响。我们的研究结果为 GABA 信号在 T 细胞介导的免疫中的免疫调节功能提供了证据,并为自身免疫性疾病的病因和治疗提供了指导。

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