OpenKBP:开放访问基于知识的规划大挑战和数据集。

OpenKBP: The open-access knowledge-based planning grand challenge and dataset.

机构信息

Department of Mechanical and Industrial Engineering, University of Toronto, 5 King's College Road, Toronto, ON, M5S 3G8, Canada.

Department of Radiation Oncology, University of California, San Diego, 3855 Health Sciences Drive, La Jolla, CA, 92104, USA.

出版信息

Med Phys. 2021 Sep;48(9):5549-5561. doi: 10.1002/mp.14845. Epub 2021 Jun 22.

Abstract

PURPOSE

To advance fair and consistent comparisons of dose prediction methods for knowledge-based planning (KBP) in radiation therapy research.

METHODS

We hosted OpenKBP, a 2020 AAPM Grand Challenge, and challenged participants to develop the best method for predicting the dose of contoured computed tomography (CT) images. The models were evaluated according to two separate scores: (a) dose score, which evaluates the full three-dimensional (3D) dose distributions, and (b) dose-volume histogram (DVH) score, which evaluates a set DVH metrics. We used these scores to quantify the quality of the models based on their out-of-sample predictions. To develop and test their models, participants were given the data of 340 patients who were treated for head-and-neck cancer with radiation therapy. The data were partitioned into training ( ), validation ( ), and testing ( ) datasets. All participants performed training and validation with the corresponding datasets during the first (validation) phase of the Challenge. In the second (testing) phase, the participants used their model on the testing data to quantify the out-of-sample performance, which was hidden from participants and used to determine the final competition ranking. Participants also responded to a survey to summarize their models.

RESULTS

The Challenge attracted 195 participants from 28 countries, and 73 of those participants formed 44 teams in the validation phase, which received a total of 1750 submissions. The testing phase garnered submissions from 28 of those teams, which represents 28 unique prediction methods. On average, over the course of the validation phase, participants improved the dose and DVH scores of their models by a factor of 2.7 and 5.7, respectively. In the testing phase one model achieved the best dose score (2.429) and DVH score (1.478), which were both significantly better than the dose score (2.564) and the DVH score (1.529) that was achieved by the runner-up models. Lastly, many of the top performing teams reported that they used generalizable techniques (e.g., ensembles) to achieve higher performance than their competition.

CONCLUSION

OpenKBP is the first competition for knowledge-based planning research. The Challenge helped launch the first platform that enables researchers to compare KBP prediction methods fairly and consistently using a large open-source dataset and standardized metrics. OpenKBP has also democratized KBP research by making it accessible to everyone, which should help accelerate the progress of KBP research. The OpenKBP datasets are available publicly to help benchmark future KBP research.

摘要

目的

推进知识基计划(KBP)剂量预测方法在放射治疗研究中的公平和一致比较。

方法

我们举办了 2020 年 AAPM 大挑战赛 OpenKBP,挑战参与者开发预测勾画 CT(计算机断层扫描)图像剂量的最佳方法。根据两个独立的评分标准评估模型:(a)剂量评分,评估完整的三维(3D)剂量分布,(b)剂量-体积直方图(DVH)评分,评估一组 DVH 指标。我们根据模型的样本外预测结果,使用这些评分来量化模型的质量。为了开发和测试他们的模型,参与者使用了 340 名接受头颈部癌症放射治疗的患者的数据。数据分为训练集( )、验证集( )和测试集( )。所有参与者都在挑战赛的第一阶段(验证阶段)使用相应的数据集进行训练和验证。在第二阶段(测试阶段),参与者使用他们的模型对测试数据进行量化,结果对参与者保密,并用于确定最终的竞赛排名。参与者还回答了一份总结他们模型的调查。

结果

挑战赛吸引了来自 28 个国家的 195 名参与者,其中 73 名参与者在验证阶段组成了 44 个团队,共提交了 1750 次。测试阶段收到了其中 28 个团队的提交,代表了 28 种不同的预测方法。平均而言,在验证阶段的过程中,参与者将模型的剂量和 DVH 评分分别提高了 2.7 倍和 5.7 倍。在测试阶段,一个模型获得了最佳的剂量评分(2.429)和 DVH 评分(1.478),都显著优于亚军模型的剂量评分(2.564)和 DVH 评分(1.529)。最后,许多表现最好的团队报告说,他们使用了可推广的技术(例如,集成)来实现比竞争对手更高的性能。

结论

OpenKBP 是第一个知识基计划研究的竞赛。该挑战赛帮助启动了第一个平台,使研究人员能够使用大型开源数据集和标准化指标公平一致地比较 KBP 预测方法。OpenKBP 通过使其对所有人开放,使 KBP 研究民主化,这应该有助于加速 KBP 研究的进展。OpenKBP 数据集可供公众使用,以帮助为未来的 KBP 研究提供基准。

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