Ayra Litzy, Reyero-Saavedra María Del Rocio, Isidra-Arellano Mariel C, Lozano Luis, Ramírez Mario, Leija Alfonso, Fuentes Sara-Isabel, Girard Lourdes, Valdés-López Oswaldo, Hernández Georgina
Programa de Genómica Funcional de Eukaryotes, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mexico.
Laboratorio de Genómica Funcional de Leguminosas, Facultad de Estudios Superiores Iztacala, Universidad Nacional Autónoma de México, Tlalnepantla de Baz, Mexico.
Front Plant Sci. 2021 Jun 7;12:679463. doi: 10.3389/fpls.2021.679463. eCollection 2021.
Plants MADS-domain/AGL proteins constitute a large transcription factor (TF) family that controls the development of almost every plant organ. We performed a phylogeny of (. 500) MADS-domain proteins from Arabidopsis and four legume species. We identified clades with Arabidopsis MADS-domain proteins known to participate in root development that grouped legume MADS-proteins with similar high expression in roots and nodules. In this work, we analyzed the role of AGL transcription factors in the common bean () - N-fixing symbiosis. Sixteen genes (), out of 93 family members, are expressed - at different levels - in roots and nodules. From there, we selected the gene denominated -like for overexpression or silencing in composite plants, with transgenic roots and nodules, that were used for phenotypic analysis upon inoculation with . Because of sequence identity in the DNA sequence used for RNAi-like construct, roots, and nodules expressing this construct -referred to as RNAi_- showed lower expression of other five genes highly expressed in roots/nodules. Contrasting with -like overexpressing plants, rhizobia-inoculated plants expressing the RNAi_ silencing construct presented affection in the generation and growth of transgenic roots from composite plants, both under non-inoculated or rhizobia-inoculated condition. Furthermore, the rhizobia-inoculated plants showed decreased rhizobial infection concomitant with the lower expression level of early symbiotic genes and increased number of small, ineffective nodules that indicate an alteration in the autoregulation of the nodulation symbiotic process. We propose that the positive effects of PvAGL TF in the rhizobia symbiotic processes result from its potential interplay with NIN, the master symbiotic TF regulator, that showed a CArG-box consensus DNA sequence recognized for DNA binding of AGL TF and presented an increased or decreased expression level in roots from non-inoculated plants transformed with OE_ or RNAi_ construct, respectively. Our work contributes to defining novel transcriptional regulators for the common bean - rhizobia N-fixing symbiosis, a relevant process for sustainable agriculture.
植物MADS结构域/AGL蛋白构成了一个大型转录因子(TF)家族,该家族控制着几乎每一个植物器官的发育。我们对来自拟南芥和四种豆科植物的(超过500种)MADS结构域蛋白进行了系统发育分析。我们鉴定出了一些进化枝,其中包含已知参与根发育的拟南芥MADS结构域蛋白,这些进化枝将在根和根瘤中具有相似高表达的豆科MADS蛋白归为一类。在这项研究中,我们分析了AGL转录因子在普通菜豆(Phaseolus vulgaris)与固氮共生过程中的作用。在93个家族成员中,有16个PvAGL基因在根和根瘤中以不同水平表达。从这些基因中,我们选择了命名为PvAGL11-like的基因,用于在具有转基因根和根瘤的复合植株中进行过表达或沉默,这些复合植株在接种根瘤菌后用于表型分析。由于用于RNAi样构建体的DNA序列存在序列同一性,表达该构建体(称为RNAi_PvAGL11)的根和根瘤显示出在根/根瘤中高表达的其他五个PvAGL基因的表达降低。与PvAGL11-like过表达植株形成对比的是,表达RNAi_PvAGL11沉默构建体的接种根瘤菌的植株,在未接种或接种根瘤菌的条件下,复合植株转基因根的生成和生长均受到影响。此外,接种根瘤菌的植株显示根瘤菌感染减少,同时早期共生基因的表达水平降低,小的、无效根瘤的数量增加,这表明结瘤共生过程的自动调节发生了改变。我们提出,PvAGL转录因子在根瘤菌共生过程中的积极作用源于其与主要共生转录因子调节因子NIN的潜在相互作用,NIN显示出一个被AGL转录因子识别用于DNA结合的CArG-box共有DNA序列,并且在分别用OE_PvAGL11或RNAi_PvAGL11构建体转化的未接种植株的根中呈现出表达水平的升高或降低。我们的工作有助于确定普通菜豆与根瘤菌固氮共生的新型转录调节因子,这是可持续农业中的一个重要过程。