Li Chunhong, Nong Qingqing, Guan Bin, He Haoyu, Zhang Zhiyong
Department of Environmental Health, School of Public Health, Guangxi Medical University, Nanning, China.
Department of Environmental Health, School of Public Health, Guilin medical University, Guilin, China.
Iran J Public Health. 2021 Jan;50(1):152-160. doi: 10.18502/ijph.v50i1.5082.
We attempt to identify specific differentially methylated and expressed genes in people with longevity family history, it will contribute to discover significant features about human longevity.
A prevalence study was conducted during October 2017 to January 2019 in Bama County of Guangxi, China and individuals were recruited and grouped into longevity family (n=60) and non-longevity family (n=60) to identify differentially methylated genes (DMGs). The expression profile dataset GSE16717 was downloaded from the GEO database in which individuals were divided into 3 groups, namely longevity (n=50), longevity offspring (n=50) and control (n=50) for identifying differentially expressed genes (DEGs). It was considered significantly different when or adjusted ≤0.05.
In total, 117 longevity-related hypermethylated genes enriched in interleukin secretion/production regulation, chemokine signaling pathway and natural killer cell-mediated cytotoxicity. Another 296 significant key longevity-related DEGs primarily involved in protein binding, nucleus, cytoplasm, T cell receptor signaling pathway and Metabolic pathway, and PFKFB4 were found to be both methylated and downregulated in people with longevity family history.
Human longevity-specific genes involve in many immunity regulations and cellular immunity pathways, and show hypermethylated and suppressed status in people with longevity family history and might serve as longevity candidate genes.
我们试图识别有长寿家族史人群中特定的差异甲基化和表达基因,这将有助于发现人类长寿的显著特征。
2017年10月至2019年1月在中国广西巴马县进行了一项患病率研究,招募个体并分为长寿家族组(n = 60)和非长寿家族组(n = 60)以识别差异甲基化基因(DMG)。从GEO数据库下载表达谱数据集GSE16717,其中个体分为3组,即长寿组(n = 50)、长寿后代组(n = 50)和对照组(n = 50),用于识别差异表达基因(DEG)。当或调整后≤0.05时,认为差异显著。
总共,117个与长寿相关的高甲基化基因富集于白细胞介素分泌/产生调节、趋化因子信号通路和自然杀伤细胞介导的细胞毒性。另外296个与长寿相关的重要关键DEG主要涉及蛋白质结合、细胞核、细胞质、T细胞受体信号通路和代谢途径,并且发现PFKFB4在有长寿家族史的人群中既发生甲基化又下调。
人类长寿特异性基因涉及许多免疫调节和细胞免疫途径,并且在有长寿家族史的人群中表现出高甲基化和抑制状态,可能作为长寿候选基因。