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来自中国云南省的(藤黄科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Clusiaceae) from Yunnan Province, China.

作者信息

Yue Biying, Shi Jipu

机构信息

Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, China.

University of Chinese Academy of Sciences, Beijing, China.

出版信息

Mitochondrial DNA B Resour. 2021 Jun 15;6(7):1899-1900. doi: 10.1080/23802359.2021.1934175.

DOI:10.1080/23802359.2021.1934175
PMID:34189263
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8208116/
Abstract

Planch. & Triana is an evergreen tree classified to the genus in the family Clusiaceae. Here we report and characterize the complete chloroplast genome sequence of and its phylogenetic relationship was investigated. The chloroplast genome is 156,774 bp in length and has a typical quadripartite chromosomal structure. The genome is divided into a pair of inverted repeat regions (IR) of 27,053 bp, one small single-copy (SSC) region of 17,082 bp and a large single copy (LSC) region of 85,586 bp. The overall GC content is 36.1%. A total of 130 functional genes were annotated, including 85 protein-coding, 37 tRNA and 8 rRNA genes. The phylogenetic analysis of fully resolved it in a clade with four taxa within clusioid clade of the Malpighiales.

摘要

普兰奇和特里亚纳是一种常绿乔木,被归类于藤黄科的该属植物。在此,我们报道并描述了它的完整叶绿体基因组序列,并对其系统发育关系进行了研究。叶绿体基因组长度为156,774 bp,具有典型的四分体染色体结构。基因组分为一对27,053 bp的反向重复区域(IR)、一个17,082 bp的小单拷贝(SSC)区域和一个85,586 bp的大单拷贝(LSC)区域。总体GC含量为36.1%。共注释了130个功能基因,包括85个蛋白质编码基因、37个tRNA基因和8个rRNA基因。对它的系统发育分析将其完全解析为在金虎尾目藤黄类分支内与四个该属类群的一个分支中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07c4/8208116/9426dff5a655/TMDN_A_1934175_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07c4/8208116/9426dff5a655/TMDN_A_1934175_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07c4/8208116/9426dff5a655/TMDN_A_1934175_F0001_B.jpg

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