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大肠杆菌核糖体嘌呤霉素位点的光诱导亲和标记

Photoinduced affinity labeling of the Escherichia coli ribosome puromycin site.

作者信息

Jaynes E N, Grant P G, Giangrande G, Wieder R, Cooperman B S

出版信息

Biochemistry. 1978 Feb 21;17(4):561-9. doi: 10.1021/bi00597a001.

DOI:10.1021/bi00597a001
PMID:341968
Abstract

The photoincorporation of puromycin into Escherichia coli ribosomes has been studied in detail. Incorporation into protein L23 as a function of puromycin concentration follows a simple saturation curve and is specifically blocked by structural and functional analogues of puromycin, thus demonstrating that such incorporation proceeds via an affinity labeling process. Incorporation into L23 becomes more specific as the light fluence is reduced, indicating that such incorporation takes place from a native rather than light-denatured puromycin site. L23 remains the major labeled protein using ribosomes prepared by several procedures, suggesting the conservative nature of the site. In addition evidence is presented for affinity labeling of S14 and of a site in the RNA fraction of the 50S particle. Specific incorporation appears to proceed with an anomalously high quantum yield. The detailed photochemical mechanism is not understood, although 8-alkylation of purine moiety has been excluded. Incorporation is largely inhibited in the presence of thiol reagents.

摘要

对嘌呤霉素掺入大肠杆菌核糖体的光掺入过程进行了详细研究。嘌呤霉素掺入蛋白质L23的量随嘌呤霉素浓度的变化呈现简单的饱和曲线,并且被嘌呤霉素的结构和功能类似物特异性阻断,从而表明这种掺入是通过亲和标记过程进行的。随着光通量降低,掺入L23的特异性增强,这表明这种掺入发生在天然而非光变性的嘌呤霉素位点。使用多种方法制备的核糖体时,L23仍然是主要的标记蛋白,这表明该位点具有保守性。此外,还提供了S14和50S颗粒RNA部分中一个位点的亲和标记证据。特异性掺入似乎以异常高的量子产率进行。尽管已排除嘌呤部分的8-烷基化,但详细的光化学机制尚不清楚。在硫醇试剂存在下,掺入受到很大抑制。

相似文献

1
Photoinduced affinity labeling of the Escherichia coli ribosome puromycin site.大肠杆菌核糖体嘌呤霉素位点的光诱导亲和标记
Biochemistry. 1978 Feb 21;17(4):561-9. doi: 10.1021/bi00597a001.
2
Photoincorporation of puromycin and N-(ethyl-2-diazomalonyl)puromycin into Escherichia coli ribosomes.嘌呤霉素和N-(乙基-2-重氮丙二酰基)嘌呤霉素光掺入大肠杆菌核糖体。
Proc Natl Acad Sci U S A. 1975 Aug;72(8):2974-8. doi: 10.1073/pnas.72.8.2974.
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Photoaffinity labeling of Escherichia coli ribosomes by an aryl azide analogue of puromycin. Evidence for the functional site specificity of labeling.用嘌呤霉素的芳基叠氮类似物对大肠杆菌核糖体进行光亲和标记。标记功能位点特异性的证据。
Biochemistry. 1982 Aug 3;21(16):3809-17. doi: 10.1021/bi00259a014.
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On the structural specificity of puromycin binding to Escherichia coli ribosomes.关于嘌呤霉素与大肠杆菌核糖体结合的结构特异性
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Antibiotic effects on the photoinduced affinity labeling of Escherichia coli ribosomes by puromycin.抗生素对嘌呤霉素光诱导的大肠杆菌核糖体亲和标记的影响。
Biochemistry. 1979 May 29;18(11):2149-54. doi: 10.1021/bi00578a003.
6
Reconstitution of Escherichia coli 50S ribosomal subunits containing puromycin-modified L23: functional consequences.含有嘌呤霉素修饰的L23的大肠杆菌50S核糖体亚基的重组:功能后果
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Photoaffinity labeling of Escherichia coli ribosomes by an aryl azide analogue of puromycin. On the identification of the major covalently labeled ribosomal proteins and on the mechanism of photoincorporation.用嘌呤霉素的芳基叠氮类似物对大肠杆菌核糖体进行光亲和标记。关于主要共价标记核糖体蛋白的鉴定及光掺入机制。
Biochemistry. 1982 Aug 3;21(16):3797-808. doi: 10.1021/bi00259a013.
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Reconstitution of Escherichia coli ribosomes containing puromycin-modified S14: functional effects of the photoaffinity labeling of a protein essential for tRNA binding.含有嘌呤霉素修饰的S14的大肠杆菌核糖体的重建:对tRNA结合至关重要的一种蛋白质光亲和标记的功能影响
Biochemistry. 1986 Dec 2;25(24):8002-10. doi: 10.1021/bi00372a032.
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Immunoelectron microscopic localization of the site of photo-induced affinity labeling of the small ribosomal subunit with puromycin.用嘌呤霉素对小核糖体亚基进行光诱导亲和标记位点的免疫电子显微镜定位。
Proc Natl Acad Sci U S A. 1980 Feb;77(2):890-4. doi: 10.1073/pnas.77.2.890.
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Puromycin photoaffinity labels small- and large-subunit proteins at the A site of the Drosophila ribosome.嘌呤霉素光亲和标记果蝇核糖体A位点的小亚基和大亚基蛋白。
Biochemistry. 1985 Oct 8;24(21):5781-6. doi: 10.1021/bi00342a014.

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Mechanistic insights into antibiotic action on the ribosome through single-molecule fluorescence imaging.通过单分子荧光成像研究抗生素在核糖体上的作用机制。
Ann N Y Acad Sci. 2011 Dec;1241(1):E1-16. doi: 10.1111/j.1749-6632.2012.06839.x.
2
Immunoelectron microscopic localization of the site of photo-induced affinity labeling of the small ribosomal subunit with puromycin.用嘌呤霉素对小核糖体亚基进行光诱导亲和标记位点的免疫电子显微镜定位。
Proc Natl Acad Sci U S A. 1980 Feb;77(2):890-4. doi: 10.1073/pnas.77.2.890.
3
The binding site for ribosomal protein L2 within 23S ribosomal RNA of Escherichia coli.
大肠杆菌23S核糖体RNA中核糖体蛋白L2的结合位点。
EMBO J. 1988 Nov;7(11):3589-94. doi: 10.1002/j.1460-2075.1988.tb03236.x.