Pratt Alyssa A, Torrance Ellis L, Kasun George W, Stedman Kenneth M, de la Higuera Ignacio
Department of Biology, Center for Life in Extreme Environments, Portland State University, Portland, Oregon, USA.
Department of Biochemistry and Biophysics, Oregon State University, Corvallis, Oregon, USA.
Microbiol Resour Announc. 2021 Jul;10(26):e0042421. doi: 10.1128/MRA.00424-21. Epub 2021 Jul 1.
Nucleic acid secondary structures play important roles in regulating biological processes. StemLoop-Finder is a computational tool to recognize and annotate conserved structural motifs in large data sets. The program is optimized for the detection of stem-loop structures that may serve as origins of replication in circular replication-associated protein (Rep)-encoding single-stranded (CRESS) DNA viruses.
核酸二级结构在调节生物过程中发挥着重要作用。茎环结构查找器是一种用于识别和注释大数据集中保守结构基序的计算工具。该程序经过优化，用于检测可能作为环状复制相关蛋白（Rep）编码单链（CRESS）DNA病毒复制起点的茎环结构。
