Akhtar Naeem, Hafiz Ishfaq Ahmad, Hayat Muhammad Qasim, Potter Daniel, Abbasi Nadeem Akhtar, Habib Umer, Hussain Adil, Hafeez Hina, Bashir Muhammad Ajmal, Malik Saad Imran
Department of Horticulture, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi 46000, Pakistan.
Department of Plant Sciences, College of Agricultural and Environmental Sciences, University of California, Davis, CA 95616, USA.
Plants (Basel). 2021 Jun 22;10(7):1270. doi: 10.3390/plants10071270.
The genus L., of the family Oleaceae, includes many species occurring in the wild, or cultivated worldwide. A preliminary investigation based on inter-simple sequence repeats (ISSR) was performed to assess the genetic diversity among 28 accessions, representing nine species of from various regions, representing a range of altitudes in Pakistan. A total of 21 ISSR primers were used, which produced 570 amplified bands of different sizes, with a mean polymorphic band percentage of 98.26%. The maximum resolving power, polymorphism information content, and index values of the ISSR markers recorded for primers 6, 16, and 19 were 0.40, 12.32, and 24.21, respectively. Based on the data of the ISSR markers, the resulting UPGMA dendrogram with the Jaccard coefficient divided the 28 accessions into two main clades. At the species level, the highest values for Shannon's information index, polymorphism percentage, effective allele number, Nei's genetic variations, and genetic unbiased diversity were found in L. and L., while the lowest were observed in Hance and Skan. Based on Nei's unbiased genetic identity pairwise population matrix, the maximum identity (0.804) was observed between Willd and (Burm. f.) Andrews, and the lowest (0.566) between Skan. and L. Molecular variance analysis displayed a genetic variation of 79% among the nine populations. The study was aimed to established genetic diversity in species using ISSR markers. With the help of this technique, we were able to establish immense intra- and interspecific diversity across the species.
木犀科木犀属包含许多野生或全球栽培的物种。基于简单序列重复区间(ISSR)进行了初步调查,以评估28份种质的遗传多样性,这些种质代表了来自巴基斯坦不同地区、不同海拔高度的9个物种。共使用了21条ISSR引物,产生了570条不同大小的扩增条带,平均多态性条带百分比为98.26%。引物6、16和19记录的ISSR标记的最大分辨力、多态性信息含量和指数值分别为0.40、12.32和24.21。基于ISSR标记数据,所得的具有杰卡德系数的UPGMA聚类图将28份种质分为两个主要分支。在物种水平上,香农信息指数、多态性百分比、有效等位基因数、内氏遗传变异和遗传无偏多样性的最高值出现在[具体物种1]和[具体物种2]中,而最低值出现在[具体物种3]和[具体物种4]中。基于内氏无偏遗传同一性成对种群矩阵,在[具体物种5]和[具体物种6]之间观察到最大同一性(0.804),在[具体物种7]和[具体物种8]之间观察到最低同一性(0.566)。分子方差分析显示9个种群间的遗传变异为79%。该研究旨在利用ISSR标记确定[具体物种]的遗传多样性。借助这项技术,我们能够在[具体物种]中建立巨大的种内和种间多样性。