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来自……的两种类cif环氧水解酶的生化与结构表征

Biochemical and structural characterization of two cif-like epoxide hydrolases from .

作者信息

Taher Noor M, Hvorecny Kelli L, Burke Cassandra M, Gilman Morgan S A, Heussler Gary E, Adolf-Bryfogle Jared, Bahl Christopher D, O'Toole George A, Madden Dean R

机构信息

Department of Biochemistry and Cell Biology, Geisel School of Medicine at Dartmouth, Hanover, NH, USA.

Department of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, NH, USA.

出版信息

Curr Res Struct Biol. 2021 Feb 21;3:72-84. doi: 10.1016/j.crstbi.2021.02.002. eCollection 2021.

Abstract

Epoxide hydrolases catalyze the conversion of epoxides to vicinal diols in a range of cellular processes such as signaling, detoxification, and virulence. These enzymes typically utilize a pair of tyrosine residues to orient the substrate epoxide ring in the active site and stabilize the hydrolysis intermediate. A new subclass of epoxide hydrolases that utilize a histidine in place of one of the tyrosines was established with the discovery of the CFTR Inhibitory Factor (Cif) from . Although the presence of such Cif-like epoxide hydrolases was predicted in other opportunistic pathogens based on sequence analyses, only Cif and its homolog aCif from have been characterized. Here we report the biochemical and structural characteristics of Cfl1 and Cfl2, two Cif-like epoxide hydrolases from . Cfl1 is able to hydrolyze xenobiotic as well as biological epoxides that might be encountered in the environment or during infection. In contrast, Cfl2 shows very low activity against a diverse set of epoxides. The crystal structures of the two proteins reveal quaternary structures that build on the well-known dimeric assembly of the α/β hydrolase domain, but broaden our understanding of the structural diversity encoded in novel oligomer interfaces. Analysis of the interfaces reveals both similarities and key differences in sequence conservation between the two assemblies, and between the canonical dimer and the novel oligomer interfaces of each assembly. Finally, we discuss the effects of these higher-order assemblies on the intra-monomer flexibility of Cfl1 and Cfl2 and their possible roles in regulating enzymatic activity.

摘要

环氧化物水解酶在一系列细胞过程中催化环氧化物转化为邻二醇,这些过程包括信号传导、解毒和毒力。这些酶通常利用一对酪氨酸残基在活性位点中定位底物环氧环并稳定水解中间体。随着从[具体来源]中发现囊性纤维化跨膜传导调节因子(CFTR)抑制因子(Cif),建立了一类新的环氧化物水解酶亚类,该亚类用组氨酸取代了其中一个酪氨酸。尽管基于序列分析预测在其他机会性病原体中存在此类Cif样环氧化物水解酶,但仅对来自[具体来源]的Cif及其同源物aCif进行了表征。在这里,我们报告了来自[具体来源]的两种Cif样环氧化物水解酶Cfl1和Cfl2的生化和结构特征。Cfl1能够水解环境中或感染期间可能遇到的外源性以及生物性环氧化物。相比之下,Cfl2对多种环氧化物的活性非常低。这两种蛋白质的晶体结构揭示了基于α/β水解酶结构域众所周知的二聚体组装构建的四级结构,但拓宽了我们对新型寡聚体界面中编码的结构多样性的理解。对界面的分析揭示了两个组装体之间以及每个组装体的典型二聚体和新型寡聚体界面之间在序列保守性方面的异同。最后,我们讨论了这些高阶组装体对Cfl1和Cfl2单体内部灵活性的影响及其在调节酶活性中的可能作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b81/8244358/813db20bac3f/fx1.jpg

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