Virus and Immunity Unit, Department of Virology, Institut Pasteur, CNRS UMR 3569, Paris, France.
Vaccine Research Institute, Creteil, France.
Nature. 2021 Aug;596(7871):276-280. doi: 10.1038/s41586-021-03777-9. Epub 2021 Jul 8.
The SARS-CoV-2 B.1.617 lineage was identified in October 2020 in India. Since then, it has become dominant in some regions of India and in the UK, and has spread to many other countries. The lineage includes three main subtypes (B1.617.1, B.1.617.2 and B.1.617.3), which contain diverse mutations in the N-terminal domain (NTD) and the receptor-binding domain (RBD) of the SARS-CoV-2 spike protein that may increase the immune evasion potential of these variants. B.1.617.2-also termed the Delta variant-is believed to spread faster than other variants. Here we isolated an infectious strain of the Delta variant from an individual with COVID-19 who had returned to France from India. We examined the sensitivity of this strain to monoclonal antibodies and to antibodies present in sera from individuals who had recovered from COVID-19 (hereafter referred to as convalescent individuals) or who had received a COVID-19 vaccine, and then compared this strain with other strains of SARS-CoV-2. The Delta variant was resistant to neutralization by some anti-NTD and anti-RBD monoclonal antibodies, including bamlanivimab, and these antibodies showed impaired binding to the spike protein. Sera collected from convalescent individuals up to 12 months after the onset of symptoms were fourfold less potent against the Delta variant relative to the Alpha variant (B.1.1.7). Sera from individuals who had received one dose of the Pfizer or the AstraZeneca vaccine had a barely discernible inhibitory effect on the Delta variant. Administration of two doses of the vaccine generated a neutralizing response in 95% of individuals, with titres three- to fivefold lower against the Delta variant than against the Alpha variant. Thus, the spread of the Delta variant is associated with an escape from antibodies that target non-RBD and RBD epitopes of the spike protein.
SARS-CoV-2 的 B.1.617 谱系于 2020 年 10 月在印度被发现。自那时以来,它已在印度的一些地区和英国占主导地位,并已传播到许多其他国家。该谱系包括三个主要亚型(B.1.617.1、B.1.617.2 和 B.1.617.3),其在 SARS-CoV-2 刺突蛋白的 N 端结构域(NTD)和受体结合域(RBD)中含有多种突变,这些突变可能增加了这些变体的免疫逃逸潜力。B.1.617.2-也称为 Delta 变体-据信传播速度比其他变体快。在这里,我们从一名从印度返回法国的 COVID-19 患者中分离出了 Delta 变体的传染性株。我们研究了该菌株对单克隆抗体和从 COVID-19 康复的个体(以下称为康复个体)或已接种 COVID-19 疫苗的个体的血清中存在的抗体的敏感性,然后将该菌株与其他 SARS-CoV-2 菌株进行了比较。Delta 变体对一些抗 NTD 和抗 RBD 单克隆抗体(包括 bamlanivimab)的中和作用具有抗性,并且这些抗体与刺突蛋白的结合能力受损。从症状出现后 12 个月内的康复个体收集的血清对 Delta 变体的效力比对 Alpha 变体(B.1.1.7)低四倍。接种一剂辉瑞或阿斯利康疫苗的个体的血清对 Delta 变体几乎没有抑制作用。接种两剂疫苗可使 95%的个体产生中和反应,对 Delta 变体的滴度比对 Alpha 变体低三至五倍。因此,Delta 变体的传播与针对刺突蛋白非 RBD 和 RBD 表位的抗体的逃逸有关。