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高耐受羟基化细菌细胞色素P450 CYP105D18的特性:对罂粟碱N-氧化的见解

Characterization of high-HO-tolerant bacterial cytochrome P450 CYP105D18: insights into papaverine N-oxidation.

作者信息

Pardhe Bashu Dev, Do Hackwon, Jeong Chang-Sook, Kim Ki-Hwa, Lee Jun Hyuck, Oh Tae-Jin

机构信息

Department of Life Science and Biochemical Engineering, Graduate School, SunMoon University, Asan 31460, Republic of Korea.

Research Unit of Cryogenic Novel Material, Korea Polar Research Institute, 26, Songdomirae-ro, Yeonsu-gu, Incheon 21990, Republic of Korea.

出版信息

IUCrJ. 2021 Jun 29;8(Pt 4):684-694. doi: 10.1107/S2052252521005522. eCollection 2021 Jul 1.

Abstract

The bacterial CYP105 family is involved in secondary metabolite biosynthetic pathways and plays essential roles in the biotransformation of xenobiotics. This study investigates the newly identified HO-mediated CYP105D18 from as the first bacterial CYP for N-oxidation. The catalytic efficiency of CYP105D18 for papaverine N-oxidation was 1.43 s µ . The heme oxidation rate () was low (<0.3 min) in the presence of 200 m HO. This high HO tolerance capacity of CYP105D18 led to higher turnover prior to heme oxidation. Additionally, the high-resolution papaverine complexed structure and substrate-free structure of CYP105D18 were determined. Structural analysis and activity assay results revealed that CYP105D18 had a strong substrate preference for papaverine because of its bendable structure. These findings establish a basis for biotechnological applications of CYP105D18 in the pharmaceutical and medicinal industries.

摘要

细菌CYP105家族参与次生代谢物生物合成途径,在异源生物转化中发挥重要作用。本研究调查了新鉴定的来自[具体来源未给出]的HO介导的CYP105D18,它是首个进行N-氧化的细菌CYP。CYP105D18对罂粟碱N-氧化的催化效率为1.43 s µ 。在200 m HO存在下,血红素氧化速率()较低(<0.3 min)。CYP105D18的这种高HO耐受能力导致在血红素氧化之前有更高的周转率。此外,还确定了CYP105D18的高分辨率罂粟碱复合结构和无底物结构。结构分析和活性测定结果表明,由于其可弯曲结构,CYP105D18对罂粟碱有很强的底物偏好性。这些发现为CYP105D18在制药和医药行业的生物技术应用奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/646d/8256718/5e3989c67cd8/m-08-00684-fig1.jpg

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