Suppr超能文献

肺腺癌中15基因铁死亡特征的构建与验证

Construction and validation of a 15-gene ferroptosis signature in lung adenocarcinoma.

作者信息

Tu Guangxu, Peng Weilin, Cai Qidong, Zhao Zhenyu, Peng Xiong, He Boxue, Zhang Pengfei, Shi Shuai, Tao Yongguang, Wang Xiang

机构信息

Department of Thoracic Surgery, The Second Xiangya Hospital, Central South University, Changsha, Hunan, China.

Hunan Key Laboratory of Early Diagnosis and Precise Treatment of Lung Cancer, Department of Thoracic Surgery, The Second Xiangya Hospital, Central South University, Changsha, Hunan, China.

出版信息

PeerJ. 2021 Jul 7;9:e11687. doi: 10.7717/peerj.11687. eCollection 2021.

Abstract

BACKGROUND

Ferroptosis is a novel form of programmed cell death characterized by the excessive accumulation of intracellular iron and an increase in reactive oxygen species. Emerging studies have shown that ferroptosis plays a vital role in the progression of lung adenocarcinoma, but the effect of ferroptosis-related genes on prognosis has been poorly studied. The purpose of this study was to explore the prognostic value of ferroptosis-related genes.

METHODS

Lung adenocarcinoma samples were downloaded from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases. The least absolute shrinkage and selection operator (LASSO) Cox regression algorithm was used to establish a predictive signature for risk stratification. Kaplan-Meier (K-M) survival analysis and receiver operating characteristic (ROC) curve analysis were conducted to evaluate the signature. We further explored the potential correlation between the risk score model and tumor immune status.

RESULTS

A 15-gene ferroptosis signature was constructed to classify patients into different risk groups. The overall survival (OS) of patients in the high-risk group was significantly shorter than that of patients in the low-risk group. The signature could predict OS independent of other risk factors. Single-sample gene set enrichment analysis (ssGSEA) identified the difference in immune status between the two groups. Patients in the high-risk group had stronger immune suppression, especially in the antigen presentation process.

CONCLUSIONS

The 15-gene ferroptosis signature identified in this study could be a potential biomarker for prognosis prediction in lung adenocarcinoma. Targeting ferroptosis might be a promising therapeutic alternative for lung adenocarcinoma.

摘要

背景

铁死亡是一种新型的程序性细胞死亡形式,其特征是细胞内铁过度积累和活性氧增加。新兴研究表明,铁死亡在肺腺癌进展中起重要作用,但铁死亡相关基因对预后的影响研究较少。本研究的目的是探讨铁死亡相关基因的预后价值。

方法

从癌症基因组图谱(TCGA)和基因表达综合数据库(GEO)下载肺腺癌样本。使用最小绝对收缩和选择算子(LASSO)Cox回归算法建立风险分层的预测特征。进行Kaplan-Meier(K-M)生存分析和受试者工作特征(ROC)曲线分析以评估该特征。我们进一步探讨了风险评分模型与肿瘤免疫状态之间的潜在相关性。

结果

构建了一个15基因的铁死亡特征,将患者分为不同的风险组。高风险组患者的总生存期(OS)明显短于低风险组患者。该特征可独立于其他风险因素预测OS。单样本基因集富集分析(ssGSEA)确定了两组之间免疫状态的差异。高风险组患者具有更强的免疫抑制,尤其是在抗原呈递过程中。

结论

本研究中鉴定的15基因铁死亡特征可能是肺腺癌预后预测的潜在生物标志物。靶向铁死亡可能是肺腺癌一种有前景的治疗选择。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1506/8272465/82aa3c06d389/peerj-09-11687-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验