Department of Critical Care Medicine, Children's Hospital of Chongqing Medical University, Ministry of Education Key Laboratory of Child Development and Disorders, China International Science and Technology Cooperation Base of Child Development and Critical Disorders, Chongqing, P.R. China.
Eur Rev Med Pharmacol Sci. 2020 May;24(9):4745-4755. doi: 10.26355/eurrev_202005_21163.
Ferroptosis is a recently identified form of controlled cell death generally associated with the accumulation of lipid-associated reactive oxygen species (ROS). However, the molecular mechanisms underlying ferroptosis have not been established.
Microarray expression data for three human gallbladder carcinoma (GBC) and matched non-tumour specimens were downloaded from the Gene Expression Omnibus (GEO) repository. Candidate genes were filtered using bioinformatic analysis. After cell transfection, candidate gene impacts on cell proliferation, migration, invasion and ferroptosis (ferrous iron (Fe2+) and malondialdehyde (MDA) levels) were assessed.
We screened 626 differentially expressed genes (DEGs) including 465 that were downregulated and 161 that were upregulated in the three tissue pairs. These DEGs were used to construct a protein-protein interaction (PPI) network. Functional enrichment analysis revealed the top three modules in the network and four hub genes. Transcription factor AP-2 alpha (TFAP2A) was screened and showed overexpression in The Cancer Genome Atlas (TCGA) digestive system tumour data and a relationship with clinical survival. In vitro, GBC exhibited upregulated expression of TFAP2A, whose inhibition reduced GBC cell proliferation, migration, and invasion. Fe2+ and MDA levels were elevated. Moreover, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed TFAP2A enrichment in oxidative stress. Subsequent experiments demonstrated that TFAP2A silencing attenuated the expression of key genes associated with oxidative stress such as heme oxygenase 1 (HO-1), nuclear factor erythroid 2 like 2 (Nrf2), ferritin heavy chain 1 (FTH1) and NAD(P)H quinone dehydrogenase 1 (NQO1).
Bioinformatic and experimental analyses reveal that TFAP2A plays a vital role in ferroptosis and hence is a potential therapeutic target for GBC treatment.
铁死亡是一种新发现的细胞死亡形式,通常与脂质相关活性氧(ROS)的积累有关。然而,铁死亡的分子机制尚未建立。
从基因表达综合数据库(GEO)下载了三个人类胆囊癌(GBC)和匹配的非肿瘤标本的微阵列表达数据。使用生物信息学分析筛选候选基因。转染细胞后,评估候选基因对细胞增殖、迁移、侵袭和铁死亡(亚铁离子(Fe2+)和丙二醛(MDA)水平)的影响。
我们筛选了 626 个差异表达基因(DEGs),其中 465 个下调,161 个上调。这些 DEGs 用于构建蛋白质-蛋白质相互作用(PPI)网络。功能富集分析揭示了网络中的前三个模块和四个枢纽基因。转录因子 AP-2 阿尔法(TFAP2A)在癌症基因组图谱(TCGA)消化系统肿瘤数据中显示过表达,并与临床生存相关。在体外,GBC 表现出 TFAP2A 的上调表达,其抑制降低了 GBC 细胞的增殖、迁移和侵袭。Fe2+和 MDA 水平升高。此外,京都基因与基因组百科全书(KEGG)途径分析显示 TFAP2A 在氧化应激中富集。随后的实验表明,TFAP2A 沉默减弱了与氧化应激相关的关键基因的表达,如血红素加氧酶 1(HO-1)、核因子红细胞 2 样 2(Nrf2)、铁蛋白重链 1(FTH1)和 NAD(P)H 醌氧化还原酶 1(NQO1)。
生物信息学和实验分析表明,TFAP2A 在铁死亡中起着至关重要的作用,因此是 GBC 治疗的潜在治疗靶点。