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增强和刺激脲酶诱导的微生物诱导碳酸钙沉淀(MICP)生物固结过程中的本土细菌群落趋同。

Native Bacterial Community Convergence in Augmented and Stimulated Ureolytic MICP Biocementation.

机构信息

Department of Microbiology and Molecular Genetics, University of California, Davis 95616, California, United States.

Department of Civil and Environmental Engineering, University of Washington, Seattle 98195-2700, Washington, United States.

出版信息

Environ Sci Technol. 2021 Aug 3;55(15):10784-10793. doi: 10.1021/acs.est.1c01520. Epub 2021 Jul 19.

Abstract

Microbially induced calcite precipitation is a biomineralization process with numerous civil engineering and ground improvement applications. In replicate soil columns, the efficacy and microbial composition of soil bioaugmented with the ureolytic bacterium were compared to a biostimulation method that enriches native ureolytic soil bacteria under conditions analogous to field implementation. The selective enrichment resulting from sequential stimulation treatments strongly selected for Firmicutes (>97%), with and comprising 60 to 94% of high-throughput 16S rDNA sequences in each suspended community sample. Seven species of the former and two of the latter were present in greater than 10% abundance at different times, demonstrating unexpected within-genus diversity and robustness in the suspended phase of this highly selective environment. Based on longer 16S sequences, it was inferred that augmented competed poorly with natural bacteria, decreasing to below detection after nine treatments, while the native microbial community was enriched to approximately that present in the stimulated columns. These analyses were corroborated by the observed convergence in bulk ureolytic rates and calcite contents between techniques. However, a 10-fold discrepancy between the observed cell density and an activity-based estimate indicates the attached community, uncharacterized despite efforts, substantially contributes to bulk behavior.

摘要

微生物诱导碳酸钙沉淀是一种具有众多土木工程和地基改良应用的生物矿化过程。在重复的土壤柱中,比较了添加脲酶细菌的土壤生物强化的功效和微生物组成,以及在类似于现场实施的条件下富集本地脲酶土壤细菌的生物刺激方法。连续刺激处理的选择性富集强烈选择了厚壁菌门(>97%),在每个悬浮群落样本中,和 分别占高通量 16S rDNA 序列的 60%至 94%。在不同时间,前者的 7 个种和后者的 2 个种的丰度超过 10%,表明在这种高度选择性的环境的悬浮相中存在出乎意料的属内多样性和稳健性。基于更长的 16S 序列,可以推断出增强的 与天然细菌竞争不佳,在九次处理后降至检测限以下,而天然微生物群落则富集到与刺激柱中相似的水平。这些分析得到了观察到的批量脲酶活性和碳酸钙含量在技术之间收敛的证实。然而,观察到的细胞密度与基于活性的估计值之间存在 10 倍的差异表明,尽管进行了努力,附着群落在很大程度上对总体行为做出了贡献,但仍未得到充分描述。

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