Keymer Andreas, Huber Claudia, Eisenreich Wolfgang, Gutjahr Caroline
Genetics, Faculty of Biology, LMU Munich, Biocenter Martinsried, Germany.
Plant Genetics, School of Life Sciences Weihenstephan, Technical University Munich (TUM), Freising, Germany.
Bio Protoc. 2018 Apr 5;8(7):e2786. doi: 10.21769/BioProtoc.2786.
Lipid transfer from host plants to arbuscular mycorrhiza fungi was hypothesized for several years because sequenced arbuscular mycorrhiza fungal genomes lack genes encoding cytosolic fatty acid synthase ( Wewer , 2014 ; Rich , 2017 ). It was finally shown by two independent experimental approaches ( Jiang , 2017 ; Keymer , 2017 ; Luginbuehl , 2017 ). One approach used a technique called isotopolog profiling ( Keymer , 2017 ). Isotopologs are molecules, which differ only in their isotopic composition. For isotopolog profiling an organism is fed with a heavy isotope labelled precursor metabolite. Subsequently, the labelled isotopolog composition of metabolic products is analysed via mass spectrometry. The detected isotopolog pattern of the metabolite(s) of interest yields information about metabolic pathways and fluxes ( Ahmed , 2014 ). The following protocol describes an experimental setup, which enables separate isotopolog profiling of fatty acids in plant roots colonized by arbuscular mycorrhiza fungi and their associated fungal extraradical mycelium, to elucidate fluxes between both symbiotic organisms. We predict that this strategy can also be used to study metabolite fluxes between other organisms if the two interacting organisms can be physically separated.
多年来,人们一直推测存在从宿主植物到丛枝菌根真菌的脂质转移,因为已测序的丛枝菌根真菌基因组缺乏编码胞质脂肪酸合酶的基因(韦弗,2014年;里奇,2017年)。最终通过两种独立的实验方法证实了这一点(蒋,2017年;凯默,2017年;卢金布尔,2017年)。一种方法使用了一种称为同位素异构体谱分析的技术(凯默,2017年)。同位素异构体是仅在同位素组成上有所不同的分子。对于同位素异构体谱分析,给生物体喂食重同位素标记的前体代谢物。随后,通过质谱分析代谢产物的标记同位素异构体组成。检测到的目标代谢物的同位素异构体模式可提供有关代谢途径和通量的信息(艾哈迈德,2014年)。以下方案描述了一种实验设置,该设置能够对丛枝菌根真菌及其相关的真菌根外菌丝体定殖的植物根中的脂肪酸进行单独的同位素异构体谱分析,以阐明两种共生生物体之间的通量。我们预测,如果两种相互作用的生物体能够物理分离,那么这种策略也可用于研究其他生物体之间的代谢物通量。