林奈叶绿体基因组的测序与特征分析
The sequencing and characterization of chloroplast genome of Linne.
作者信息
Huizhen Sun, Xue Xinyuan
机构信息
Center for Ecological Research, Northeast Forestry University, Harbin, P.R. China.
出版信息
Mitochondrial DNA B Resour. 2021 Jul 6;6(8):2254-2255. doi: 10.1080/23802359.2021.1947912. eCollection 2021.
The complete chloroplast genome of Linne. was sequenced, assembled and annotated. It is a circular form of 150,656 bp in length, which was separated into four distinct regions, a large single copy (LSC) of 73,862 bp, a small single copy region (SSC) of 52,666 bp, two inverted repeats (IR) of 12,064bp. A total of 124 genes were predicted, of which, 87 encode proteins, 4 rRNA, 33 tRNA. The evolutionary history was inferred using Maximum Likelihood method, and the result indicates that was grouped within Geraniaceae, and comprised a clade with under 100% Bootstrap value.
对林奈（Linne.）的完整叶绿体基因组进行了测序、组装和注释。它是一个长度为150,656 bp的环状形式，分为四个不同区域，一个73,862 bp的大单拷贝（LSC），一个52,666 bp的小单拷贝区域（SSC），两个12,064 bp的反向重复序列（IR）。共预测了124个基因，其中87个编码蛋白质，4个rRNA，33个tRNA。使用最大似然法推断进化历史，结果表明其被归入牻牛儿苗科，并与[此处原文缺失相关物种名]组成一个自展值低于100%的分支。
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