Department of Soil and Environmental Sciences, College of Agriculture and Natural Resources, National Chung Hsing University, Taichung, Taiwan, ROC.
Innovation and Development Center of Sustainable Agriculture, National Chung Hsing University, Taichung, Taiwan, ROC.
Int J Syst Evol Microbiol. 2021 Jul;71(7). doi: 10.1099/ijsem.0.004901.
A polyphasic taxonomic approach was used to characterize a Gram-stain-negative bacterium, designated strain CC-YST696, harbouring antibiotic- and toxic compound-resistace genes, isolated from poultry manure in Taiwan. Cells of CC-YST696 were short rods, motile with polar flagella, catalase- and oxidase-positive. Optimal growth occurred at 30 °С, pH 9 and with 1 % NaCl. The results of phylogenetic analyses based on 16S rRNA genes revealed a distinct taxonomic position attained by CC-YST696 associated with (97.9 % sequence identity), (97.3 %) and (97.2 %), and with lower sequence similarity values to other species. Average nucleotide identity (ANI) values were 72.8-80.0 % (=17) compared within the type strains of species of of the genus . CC-YST696 contained C, C, Cω7 11-methyl and Cω6/ Cω7 as the predominant fatty acids. The polar lipid profile consisted of phosphatidylethanolamine, phosphatidylglycerol, two unidentified aminolipids, three unidentified glycolipids, two unidentified phospholipids and three unidentified lipids. The DNA G+C content was 62.2 mol% and the predominant quinone was ubiquinone Q-10. On the basis of its distinct phylogenetic, phenotypic and chemotaxonomic traits together with results of comparative 16S rRNA gene sequence and ANI analyses, strain CC-YST696 is proposed to represent a novel species of the genus , for which the name sp. nov. (type strain CC-YST696=BCRC 81284=JCM 34167) is proposed.
采用多相分类方法对一株革兰氏阴性细菌进行了表征,该菌被命名为 CC-YST696 株,分离自台湾的家禽粪便,含有抗生素和毒性化合物抗性基因。CC-YST696 细胞为短杆状,具有极性鞭毛,可运动,接触酶和氧化酶阳性。最佳生长条件为 30°C、pH 值 9 和 1%NaCl。基于 16S rRNA 基因的系统发育分析结果表明,CC-YST696 与 (97.9%序列同一性)、 (97.3%)和 (97.2%)密切相关,与其他种的序列相似性较低。与属内的模式种相比,CC-YST696 的平均核苷酸同一性(ANI)值为 72.8-80.0%(=17)。CC-YST696 含有 C 16:0、C 18:1ω7c 和 C 11-methyl 16:0、C 16:0 和 C 18:1ω7c 作为主要脂肪酸。极性脂谱由磷脂酰乙醇胺、磷脂酰甘油、两种未鉴定的胺脂、三种未鉴定的糖脂、两种未鉴定的磷脂和三种未鉴定的脂类组成。DNA G+C 含量为 62.2mol%,主要醌为泛醌 Q-10。基于其独特的系统发育、表型和化学分类特征,以及 16S rRNA 基因序列和 ANI 分析的比较结果,CC-YST696 菌株被提议代表属的一个新种,命名为 sp. nov.(模式菌株 CC-YST696=BCRC 81284=JCM 34167)。