Tu Yanshuai, Ta Duyan, Gu Xianfeng David, Lu Zhong-Lin, Wang Yalin
School of Computing, Informatics, Decision Systems Engineering, Arizona State Univ., Tempe, AZ.
Department of Computer Science, State University of New York at Stony Brook, Stony Brook, NY.
Proc IEEE Int Symp Biomed Imaging. 2020 Apr;2020:687-691. doi: 10.1109/isbi45749.2020.9098386. Epub 2020 May 22.
Human visual cortex is organized into several functional regions/areas. Identifying these visual areas of the human brain (i.e., V1, V2, V4, etc) is an important topic in neurophysiology and vision science. Retinotopic mapping via functional magnetic resonance imaging (fMRI) provides a non-invasive way of defining the boundaries of the visual areas. It is well known from neurophysiology studies that retinotopic mapping is diffeomorphic within each local area (i.e. locally smooth, differentiable, and invertible). However, due to the low signal-noise ratio of fMRI, the retinotopic maps from fMRI are often not diffeomorphic, making it difficult to delineate the boundaries of visual areas. The purpose of this work is to generate diffeomorphic retinotopic maps and improve the accuracy of the retinotopic atlas from fMRI measurements through the development of a specifically designed registration procedure. Although there are sophisticated existing cortical surface registration methods, most of them cannot fully utilize the features of retinotopic mapping. By considering unique retinotopic mapping features, we form a quasiconformal geometry-based registration model and solve it with efficient numerical methods. We compare our registration with several popular methods on synthetic data. The results demonstrate that the proposed registration is superior to conventional methods for the registration of retinotopic maps. The application of our method to a real retinotopic mapping dataset also results in much smaller registration errors.
人类视觉皮层被组织成几个功能区域。识别大脑的这些视觉区域(即V1、V2、V4等)是神经生理学和视觉科学中的一个重要课题。通过功能磁共振成像(fMRI)进行的视网膜拓扑映射提供了一种非侵入性的方法来定义视觉区域的边界。从神经生理学研究中可知,视网膜拓扑映射在每个局部区域内是微分同胚的(即局部平滑、可微且可逆)。然而,由于fMRI的信噪比低,fMRI的视网膜拓扑图通常不是微分同胚的,这使得难以描绘视觉区域的边界。这项工作的目的是通过开发一种专门设计的配准程序来生成微分同胚的视网膜拓扑图,并提高fMRI测量的视网膜拓扑图谱的准确性。尽管现有的皮层表面配准方法很复杂,但大多数方法不能充分利用视网膜拓扑映射的特征。通过考虑独特的视网膜拓扑映射特征,我们形成了一个基于拟共形几何的配准模型,并用高效的数值方法求解。我们在合成数据上比较了我们的配准方法与几种流行方法。结果表明,所提出的配准方法在视网膜拓扑图配准方面优于传统方法。我们的方法应用于真实的视网膜拓扑映射数据集也导致配准误差小得多。