Center for Neuroscience and Department of Neurology, Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, 310058, China.
Medical Information Center, Zhejiang University School of Medicine, Hangzhou, 310058, China.
Neurosci Bull. 2021 Oct;37(10):1441-1453. doi: 10.1007/s12264-021-00744-2. Epub 2021 Jul 24.
cFos is one of the most widely-studied genes in the field of neuroscience. Currently, there is no systematic database focusing on cFos in neuroscience. We developed a curated database-cFos-ANAB-a cFos-based web tool for exploring activated neurons and associated behaviors in rats and mice, comprising 398 brain nuclei and sub-nuclei, and five associated behaviors: pain, fear, feeding, aggression, and sexual behavior. Direct relationships among behaviors and nuclei (even cell types) under specific stimulating conditions were constructed based on cFos expression profiles extracted from original publications. Moreover, overlapping nuclei and sub-nuclei with potentially complex functions among different associated behaviors were emphasized, leading to results serving as important clues to the development of valid hypotheses for exploring as yet unknown circuits. Using the analysis function of cFos-ANAB, multi-layered pictures of networks and their relationships can quickly be explored depending on users' purposes. These features provide a useful tool and good reference for early exploration in neuroscience. The cFos-ANAB database is available at www.cfos-db.net .
cFos 是神经科学领域研究最广泛的基因之一。目前,尚无专门针对神经科学中 cFos 的系统数据库。我们开发了一个经过精心整理的数据库-cFos-ANAB-一个基于 cFos 的大鼠和小鼠激活神经元和相关行为的网络工具,包含 398 个脑核和亚核,以及五种相关行为:疼痛、恐惧、进食、攻击和性行为。根据从原始出版物中提取的 cFos 表达谱,构建了特定刺激条件下行为和核(甚至细胞类型)之间的直接关系。此外,强调了不同相关行为之间具有潜在复杂功能的重叠核和亚核,为探索未知回路的有效假设提供了重要线索。使用 cFos-ANAB 的分析功能,根据用户的目的,可以快速探索网络及其关系的多层次图片。这些功能为神经科学的早期探索提供了有用的工具和良好的参考。cFos-ANAB 数据库可在 www.cfos-db.net 上获得。