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人类诱导多能干细胞(hiPSCs)中的基因组编辑。

Genome Editing in Human Induced Pluripotent Stem Cells (hiPSCs).

机构信息

Department of Medical Therapeutics for Heart Failure, Osaka University Graduate School of Medicine, Osaka, Japan.

Department of Cardiovascular Medicine, Osaka University Graduate School of Medicine, Osaka, Japan.

出版信息

Methods Mol Biol. 2021;2320:235-245. doi: 10.1007/978-1-0716-1484-6_21.

Abstract

Cardiomyocytes differentiated from human induced pluripotent stem cells (hiPSCs) are powerful tools for elucidating the pathology behind inherited cardiomyopathies. Genome editing technologies enable targeted genome replacement and the generation of isogenic hiPSCs, allowing investigators to precisely determine the roles of identified mutations. Here, we describe a protocol to obtain isogenic hiPSCs with the corrected allele via homology-directed repair (HDR) using CRISPR/Cas9 genome editing under feeder-free conditions. Seeding hiPSCs in a 24-well plate and conducting the initial evaluation using direct genomic sequencing after 1 week is cost- and time-effective. Following optimization of the protocol, sequence confirmation of the corrected HDR clone is completed within 21 days.

摘要

从人诱导多能干细胞 (hiPSC) 分化而来的心肌细胞是阐明遗传性心肌病背后病理的有力工具。基因组编辑技术可实现靶向基因组替换和同基因 hiPSC 的产生,使研究人员能够精确确定已鉴定突变的作用。在这里,我们描述了一种在无饲养层条件下使用 CRISPR/Cas9 基因组编辑通过同源定向修复 (HDR) 获得具有校正等位基因的同基因 hiPSC 的方案。在一周后直接进行基因组测序的初始评估,在 24 孔板中接种 hiPSC 可节省成本和时间。在优化方案后,可在 21 天内完成校正 HDR 克隆的序列确认。

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