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从意大利食品中分离出的潜在机会致病菌红色沙雷氏菌的基因组序列草图

Draft Genome Sequence of Serratia rubidaea, a Potential Opportunistic Pathogen Isolated from Food in Italy.

作者信息

Chiaverini Alexandra, Di Domenico Marco, Del Matto Ilaria, Rossi Franca, Centorotola Gabriella, Cornacchia Alessandra, Cornacchione Nicola, Petrone Domenico, Iannitto Giorgio, Marino Lucio, Cammà Cesare, Pomilio Francesco

机构信息

Hygiene in Food Technology and Animal Feeds, Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise "G. Caporale," Teramo, Italy.

National Reference Centre for Whole Genome Sequencing of Microbial Pathogens: Database and Bioinformatic Analysis, Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise "G. Caporale," Teramo, Italy.

出版信息

Microbiol Resour Announc. 2021 Jul 29;10(30):e0070721. doi: 10.1128/MRA.00707-21.

DOI:10.1128/MRA.00707-21
PMID:34323601
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8320446/
Abstract

Serratia rubidaea has emerged in recent years as an opportunistic nosocomial pathogen. Here, we present the draft genome sequence of an isolate derived from an industrial meat food product purchased in a large-scale retail store that revealed fluoroquinolone, β-lactam, and aminoglycoside resistance genes and two different host-unspecific prophages.

摘要

近年来，深红沙雷氏菌已成为一种机会性医院病原体。在此，我们展示了从一家大型零售店购买的工业肉类食品中分离出的菌株的基因组草图序列，该序列揭示了氟喹诺酮、β-内酰胺和氨基糖苷类抗性基因以及两种不同的宿主非特异性原噬菌体。

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RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation.RefSeq：通过蛋白质家族模型编纂扩展原核生物基因组注释管道的覆盖范围。
Nucleic Acids Res. 2021 Jan 8;49(D1):D1020-D1028. doi: 10.1093/nar/gkaa1105.
2
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Trans R Soc Trop Med Hyg. 2018 Oct 1;112(10):467-472. doi: 10.1093/trstmh/try077.
3
A Validation Approach of an End-to-End Whole Genome Sequencing Workflow for Source Tracking of and .一种用于[具体内容]来源追踪的端到端全基因组测序工作流程的验证方法。 （原文中“and.”部分内容缺失，这是按照现有内容尽量准确翻译的结果）
Front Microbiol. 2018 Mar 14;9:446. doi: 10.3389/fmicb.2018.00446. eCollection 2018.
4
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Arch Virol. 2017 Jul;162(7):2021-2028. doi: 10.1007/s00705-017-3300-x. Epub 2017 Mar 6.
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Nucleic Acids Res. 2017 Jan 4;45(D1):D566-D573. doi: 10.1093/nar/gkw1004. Epub 2016 Oct 26.
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PHASTER: a better, faster version of the PHAST phage search tool.PHASTER：PHAST噬菌体搜索工具的一个更好、更快的版本。
Nucleic Acids Res. 2016 Jul 8;44(W1):W16-21. doi: 10.1093/nar/gkw387. Epub 2016 May 3.
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Complete Genome Sequence of Serratia rubidaea Isolated in China.中国分离的深红沙雷氏菌全基因组序列
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