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不同状态下胶质瘤预后特征的鉴定

Identification of the Prognostic Signatures of Glioma With Different Status.

作者信息

Zhang Pei, Meng Xinyi, Liu Liqun, Li Shengzhen, Li Yang, Ali Sakhawat, Li Shanhu, Xiong Jichuan, Liu Xuefeng, Li Shouwei, Xia Qin, Dong Lei

机构信息

School of Life Science, Beijing Institute of Technology, Beijing, China.

Department of Cell Engineering, Beijing Institute of Biotechnology, Beijing, China.

出版信息

Front Oncol. 2021 Jul 14;11:633357. doi: 10.3389/fonc.2021.633357. eCollection 2021.

Abstract

The high-grade glioma is characterized by cell heterogeneity, gene mutations, and poor prognosis. The deletions and mutations of the tumor suppressor gene (5%-40%) in glioma patients are associated with worse survival and therapeutic resistance. Characterization of unique prognosis molecular signatures by status in glioma is still unclear. This study established a novel risk model, screened optimal prognostic signatures, and calculated the risk score for the individual glioma patients with different status. Screening results revealed fourteen independent prognostic gene signatures in PTEN-wt and three in the -50PTEN-mut subgroup. Moreover, we verified risk score as an independent prognostic factor significantly correlated with tumor malignancy. Due to the higher malignancy of the PTEN-mut gliomas, we explored the independent prognostic signatures (, , and ) for a potential therapeutic target in PTEN-mut glioma. We further separated IDH wild-type glioma patients into GBM and LGG to verify the therapeutic target along with PTEN status, notably, the above screened therapeutic targets are also significant prognostic genes in both IDH-wt/PTEN-mut GBM and LGG patients. We further identified the small molecule compound (+)-JQ1 binds to all three targets, indicating a potential therapy for PTEN-mut glioma. In sum, gene signatures and risk scores in the novel risk model facilitate glioma diagnosis, prognosis prediction, and treatment.

摘要

高级别胶质瘤具有细胞异质性、基因突变和预后不良的特点。胶质瘤患者中肿瘤抑制基因的缺失和突变(5%-40%)与较差的生存率和治疗抗性相关。通过胶质瘤中的状态表征独特的预后分子特征仍不清楚。本研究建立了一种新型风险模型,筛选了最佳预后特征,并计算了不同状态的个体胶质瘤患者的风险评分。筛选结果显示在PTEN野生型中有14个独立的预后基因特征,在-50PTEN突变亚组中有3个。此外,我们验证了风险评分作为与肿瘤恶性程度显著相关的独立预后因素。由于PTEN突变型胶质瘤的恶性程度较高,我们探索了PTEN突变型胶质瘤潜在治疗靶点的独立预后特征(、和)。我们进一步将异柠檬酸脱氢酶(IDH)野生型胶质瘤患者分为胶质母细胞瘤(GBM)和低级别胶质瘤(LGG),以结合PTEN状态验证治疗靶点,值得注意的是,上述筛选出的治疗靶点在IDH野生型/PTEN突变型GBM和LGG患者中也是重要的预后基因。我们进一步鉴定出小分子化合物(+)-JQ1与所有三个靶点结合,表明其对PTEN突变型胶质瘤具有潜在治疗作用。总之,新型风险模型中的基因特征和风险评分有助于胶质瘤的诊断、预后预测和治疗。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cace/8317988/c34b7965150c/fonc-11-633357-g001.jpg

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