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基于污水的肠道病毒流行病学和资源有限地区急性胃肠道疾病爆发的监测。

Wastewater-Based Epidemiology of Enteric Viruses and Surveillance of Acute Gastrointestinal Illness Outbreaks in a Resource-Limited Region.

机构信息

Instituto de Investigaciones en Salud (INISA), Universidad de Costa Rica, San José, Costa Rica.

Laboratorio Nacional de Aguas (LNA), Instituto Costarricense de Acueductos y Alcantarillados, San José, Costa Rica.

出版信息

Am J Trop Med Hyg. 2021 Aug 2;105(4):1004-1012. doi: 10.4269/ajtmh.21-0050.

Abstract

Acute gastrointestinal illness (AGI) continues to be an important cause of morbidity and mortality among all ages. This study applied the principles of wastewater-based epidemiology for the preventive identification of potential outbreaks of acute viral gastroenteritis and hepatitis A by analyzing the presence of human enteric viruses in influents of small municipal wastewater treatment plants (WWTPs) handling domestic sewage, together with public health reports of acute diarrheal and hepatitis A disease in Costa Rica during 2013. Raw wastewater samples were collected during four seasonal periods with different rainfall levels. The presence of five human enteric viruses (rotavirus A, norovirus GI, norovirus GII, enterovirus, and hepatitis A virus) was studied by endpoint and real-time polymerase chain reaction in influents of five WWTPs. Cases of AGI were analyzed using historical public health reports of endemic levels and quartile ranges for each administrative and territorial area where the WWTPs are located and for its surrounding counties. A tendency for a higher rate of positive viral tests was present 1 week before an increase of AGI cases. Epidemiological weeks categorized as Outbreak (above the 75th percentile) and Success (below the 25th percentile) showed statistically significant differences in terms of positive viral test rates (Wilcoxon test, P = 0.05). Virological monitoring of wastewater in small WWTPs is an appropriate model for epidemiological surveillance of diarrheal and hepatitis A diseases in low- and middle-resource countries.

摘要

急性胃肠道疾病(AGI)仍然是各年龄段发病率和死亡率的重要原因。本研究通过分析处理生活污水的小型城市污水处理厂(WWTP)进水样本中人类肠道病毒的存在情况,并结合哥斯达黎加 2013 年急性腹泻和甲型肝炎的公共卫生报告,应用基于污水的流行病学原理,对急性病毒性胃肠炎和甲型肝炎的潜在暴发进行预防性识别。在四个具有不同降雨水平的季节性期间采集了原始污水样本。在五个 WWTP 的进水中,通过终点和实时聚合酶链反应研究了五种人类肠道病毒(轮状病毒 A、诺如病毒 GI、诺如病毒 GII、肠道病毒和甲型肝炎病毒)的存在情况。使用 WWTP 所在行政和领土区域以及周边县的地方性水平和四分位范围的历史公共卫生报告,对 AGI 病例进行了分析。在 AGI 病例增加前 1 周,阳性病毒检测率呈上升趋势。归类为暴发(高于第 75 个百分位数)和成功(低于第 25 个百分位数)的流行病学周在阳性病毒检测率方面存在统计学差异(Wilcoxon 检验,P = 0.05)。小型 WWTP 的污水病毒学监测是低资源和中等资源国家监测腹泻和甲型肝炎疾病的流行病学的合适模型。

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