Department of Experimental Medicine, TOR, University of Rome Tor Vergata, 00133, Rome, Italy.
School of Life Sciences, University of Nottingham, Nottingham, UK.
Biol Direct. 2021 Aug 4;16(1):11. doi: 10.1186/s13062-021-00296-5.
Most inactivating mutations in TP53 gene generates neomorphic forms of p53 proteins that experimental evidence and clinical observations suggest to exert gain-of-function effects. While massive effort has been deployed in the dissection of wild type p53 transcriptional programme, p53 mutant pro-tumorigenic gene network is still largely elusive. To help dissecting the molecular basis of p53 mutant GOF, we performed an analysis of a fully annotated genomic and transcriptomic human pancreatic adenocarcinoma to select candidate players of p53 mutant network on the basis their differential expression between p53 mutant and p53 wild-type cohorts and their prognostic value. We identified NUAK2 and RCan2 whose p53 mutant GOF-dependent regulation was further validated in pancreatic cancer cellular model. Our data demonstrated that p53 can physically bind RCan2 gene locus in regulatory regions corresponding to the chromatin permissive areas where known binding partners of p53 mutant, such as p63 and Srebp, bind. Overall, starting from clinically relevant data and progressing into experimental validation, our work suggests NUAK2 and RCan2 as novel candidate players of the p53 mutant pro-tumorigenic network whose prognostic and therapeutic interest might attract future studies.
TP53 基因中的大多数失活突变会产生 p53 蛋白的新形式,实验证据和临床观察表明这些新形式具有获得功能效应。虽然人们在解析野生型 p53 转录程序方面付出了巨大努力,但 p53 突变体促进肿瘤发生的基因网络仍然很大程度上难以捉摸。为了帮助解析 p53 突变体获得功能的分子基础,我们对一个完全注释的基因组和转录组人类胰腺腺癌进行了分析,根据它们在 p53 突变体和 p53 野生型队列之间的差异表达以及它们的预后价值,选择 p53 突变体网络的候选参与者。我们确定了 NUAK2 和 RCan2,它们的 p53 突变体获得功能依赖性调节在胰腺癌细胞模型中得到了进一步验证。我们的数据表明,p53 可以在与 p63 和 Srebp 等 p53 突变体已知结合伴侣结合的染色质允许区域的调节区域中物理结合 RCan2 基因座。总的来说,从临床相关数据开始,并进行实验验证,我们的工作表明 NUAK2 和 RCan2 是 p53 突变体促进肿瘤发生的网络的新候选参与者,它们的预后和治疗意义可能会吸引未来的研究。