Sugier Kevin, Laso-Jadart Romuald, Vacherie Benoît, Käfer Jos, Bertrand Laurie, Labadie Karine, Martins Nathalie, Orvain Céline, Petit Emmanuelle, Wincker Patrick, Jamet Jean-Louis, Alberti Adriana, Madoui Mohammed-Amin
Génomique Métabolique, Genoscope, Institut François Jacob, Univ Evry, Université Paris-Saclay, 91000 Evry, France.
Genoscope, Institut de Biologie François-Jacob, Commissariat à l'Energie Atomique (CEA), Université Paris-Saclay, 91000 Evry, France.
Biology (Basel). 2021 Jul 13;10(7):657. doi: 10.3390/biology10070657.
Copepods are among the most numerous animals, and they play an essential role in the marine trophic web and biogeochemical cycles. The genus Oithona is described as having the highest density of copepods. The Oithona male paradox describes the activity states of males, which are obliged to alternate between immobile and mobile phases for ambush feeding and mate searching, respectively, while the female is less mobile and feeds less. To characterize the molecular basis of this sexual dimorphism, we combined immunofluorescence, genomics, transcriptomics, and protein-protein interaction approaches and revealed the presence of a male-specific nervous ganglion. Transcriptomic analysis showed male-specific enrichment for nervous system development-related transcripts. Twenty-seven Lin12-Notch Repeat domain-containing protein coding genes (LDPGs) of the 75 LDPGs identified in the genome were specifically expressed in males. Furthermore, some LDPGs coded for proteins with predicted proteolytic activity, and proteases-associated transcripts showed a male-specific enrichment. Using yeast double-hybrid assays, we constructed a protein-protein interaction network involving two LDPs with proteases, extracellular matrix proteins, and neurogenesis-related proteins. We also hypothesized possible roles of the LDPGs in the development of the lateral ganglia through helping in extracellular matrix lysis, neurites growth guidance, and synapses genesis.
桡足类是数量最多的动物之一,它们在海洋营养网和生物地球化学循环中发挥着重要作用。奥氏哲水蚤属被描述为桡足类密度最高的属。奥氏哲水蚤雄性悖论描述了雄性的活动状态,雄性必须在不活动和活动阶段之间交替,分别用于伏击觅食和寻找配偶,而雌性活动较少且进食较少。为了表征这种性别二态性的分子基础,我们结合了免疫荧光、基因组学、转录组学和蛋白质 - 蛋白质相互作用方法,揭示了存在一个雄性特异性神经节。转录组分析显示与神经系统发育相关的转录本在雄性中特异性富集。在基因组中鉴定出的75个含Lin12 - Notch重复结构域的蛋白质编码基因(LDPGs)中有27个在雄性中特异性表达。此外,一些LDPGs编码具有预测蛋白水解活性的蛋白质,并且与蛋白酶相关的转录本显示出雄性特异性富集。使用酵母双杂交试验,我们构建了一个蛋白质 - 蛋白质相互作用网络,涉及两个LDPs与蛋白酶、细胞外基质蛋白和神经发生相关蛋白。我们还推测了LDPGs通过帮助细胞外基质裂解、神经突生长引导和突触发生,在侧神经节发育中的可能作用。