Łubkowska Beata, Jeżewska-Frąckowiak Joanna, Sobolewski Ireneusz, Skowron Piotr M
Department of Molecular Biotechnology, Faculty of Chemistry, University of Gdansk, Wita Stwosza 63, 80-308 Gdansk, Poland.
The High School of Health in Gdansk, Pelplinska 7, 80-335 Gdansk, Poland.
Microorganisms. 2021 Jul 16;9(7):1522. doi: 10.3390/microorganisms9071522.
Bacteriophages of thermophiles are of increasing interest owing to their important roles in many biogeochemical, ecological processes and in biotechnology applications, including emerging bionanotechnology. However, due to lack of in-depth investigation, they are underrepresented in the known prokaryotic virosphere. Therefore, there is a considerable potential for the discovery of novel bacteriophage-host systems in various environments: marine and terrestrial hot springs, compost piles, soil, industrial hot waters, among others. This review aims at providing a reference compendium of thermophages characterized thus far, which infect the species of thermophilic ' group' bacteria, mostly from sp. We have listed 56 thermophages, out of which the majority belong to the family, others belong to the and families and, apparently, a few belong to the or families. All of their genomes are composed of dsDNA, either linear, circular or circularly permuted. Fourteen genomes have been sequenced; their sizes vary greatly from 35,055 bp to an exceptionally large genome of 160,590 bp. We have also included our unpublished data on TP-84, which infects (). Since the TP-84 genome sequence shows essentially no similarity to any previously characterized bacteriophage, we have defined TP-84 as a new species in the newly proposed genus within the family. The information summary presented here may be helpful in comparative deciphering of the molecular basis of the thermophages' biology, biotechnology and in analyzing the environmental aspects of the thermophages' effect on the thermophile community.
嗜热菌噬菌体因其在许多生物地球化学、生态过程以及生物技术应用(包括新兴的生物纳米技术)中发挥的重要作用而受到越来越多的关注。然而,由于缺乏深入研究,它们在已知的原核病毒圈中的代表性不足。因此,在各种环境中发现新型噬菌体 - 宿主系统具有相当大的潜力:海洋和陆地温泉、堆肥堆、土壤、工业热水等。本综述旨在提供一份迄今为止已鉴定的嗜热噬菌体参考汇编,这些噬菌体感染嗜热“类群”细菌的物种,主要来自 属。我们列出了56种嗜热噬菌体,其中大多数属于 科,其他属于 科和 科,显然还有少数属于 科或 科。它们所有的基因组均由双链DNA组成,要么是线性的、环状的,要么是环状排列的。14个基因组已被测序;其大小差异很大,从35,055碱基对到一个异常大的160,590碱基对的基因组。我们还纳入了我们关于感染 ( )的TP - 84的未发表数据。由于TP - 84基因组序列与任何先前鉴定的噬菌体基本没有相似性,我们将TP - 84定义为 科新提议属中的一个新物种。此处呈现的信息总结可能有助于比较解读嗜热噬菌体生物学、生物技术的分子基础,以及分析嗜热噬菌体对嗜热菌群落影响的环境方面。