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染色体凝聚调节因子1结构域蛋白DEK47在玉米线粒体内含子剪接和种子发育中发挥作用。

Regulator of Chromosome Condensation 1-Domain Protein DEK47 Functions on the Intron Splicing of Mitochondrial and Seed Development in Maize.

作者信息

Cao Shi-Kai, Liu Rui, Sayyed Aqib, Sun Feng, Song Ruolin, Wang Xiaomin, Xiu Zhihui, Li Xiaojie, Tan Bao-Cai

机构信息

Key Laboratory of Plant Development and Environment Adaptation Biology, Ministry of Education, School of Life Sciences, Shandong University, Qingdao, China.

Key Laboratory of Cell Activities and Stress Adaptations, Ministry of Education, School of Life Sciences, Lanzhou University, Lanzhou, China.

出版信息

Front Plant Sci. 2021 Aug 2;12:695249. doi: 10.3389/fpls.2021.695249. eCollection 2021.

DOI:10.3389/fpls.2021.695249
PMID:34408760
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8365749/
Abstract

In flowering plants, mitochondrial genes contain approximately 20-26 introns. Splicing of these introns is essential for mitochondrial gene expression and function. Recent studies have revealed that both nucleus- and mitochondrion-encoded factors are required for intron splicing, but the mechanism of splicing remains largely unknown. Elucidation of the mechanism necessitates a complete understanding of the splicing factors. Here, we report the identification of a regulator of chromosome condensation 1 (RCC1)-domain protein DEK47 that is required for mitochondrial intron splicing and seed development in maize. Loss of function in severely arrests embryo and endosperm development, resulting in a phenotype. DEK47 harbors seven RCC1 domains and is targeted to mitochondria. Null mutation of DEK47 causes a deficiency in the splicing of all four introns, abolishing the production of mature transcript and resulting in the disassembly and severely reduced activity of mitochondrial complex I. In response, the expression of the alternative oxidase is sharply increased in . These results indicate that is required for the splicing of all the introns in mitochondria, and essential for complex I assembly, and kernel development in maize.

摘要

在开花植物中,线粒体基因含有大约20 - 26个内含子。这些内含子的剪接对于线粒体基因的表达和功能至关重要。最近的研究表明,核编码因子和线粒体编码因子都是内含子剪接所必需的,但剪接机制在很大程度上仍不清楚。阐明该机制需要全面了解剪接因子。在这里,我们报告了在玉米中鉴定出一种染色体凝聚调节因子1(RCC1)结构域蛋白DEK47,它是线粒体内含子剪接和种子发育所必需的。功能丧失严重阻碍胚胎和胚乳发育,导致一种表型。DEK47含有七个RCC1结构域,并定位于线粒体。DEK47的无效突变导致所有四个内含子的剪接缺陷,消除了成熟转录本的产生,并导致线粒体复合体I的解体和活性严重降低。作为响应,交替氧化酶的表达在……中急剧增加。这些结果表明,DEK47是线粒体中所有内含子剪接所必需的,对复合体I组装和玉米籽粒发育至关重要。

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Regulator of Chromosome Condensation 1-Domain Protein DEK47 Functions on the Intron Splicing of Mitochondrial and Seed Development in Maize.染色体凝聚调节因子1结构域蛋白DEK47在玉米线粒体内含子剪接和种子发育中发挥作用。
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引用本文的文献

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Research Progress of Group II Intron Splicing Factors in Land Plant Mitochondria.陆地植物线粒体 II 类内含子剪接因子的研究进展。
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本文引用的文献

1
nMAT3 is an essential maturase splicing factor required for holo-complex I biogenesis and embryo development in Arabidopsis thaliana plants.nMAT3 是一种必需的成熟酶剪接因子,对于拟南芥植物全酶复合物 I 的生物发生和胚胎发育是必需的。
Plant J. 2021 May;106(4):1128-1147. doi: 10.1111/tpj.15225. Epub 2021 Apr 7.
2
PPR14 Interacts With PPR-SMR1 and CRM Protein Zm-mCSF1 to Facilitate Mitochondrial Intron Splicing in Maize.PPR14与PPR-SMR1和CRM蛋白Zm-mCSF1相互作用以促进玉米线粒体内含子剪接。
Front Plant Sci. 2020 Jun 12;11:814. doi: 10.3389/fpls.2020.00814. eCollection 2020.
3
The DYW-subgroup pentatricopeptide repeat protein PPR27 interacts with ZmMORF1 to facilitate mitochondrial RNA editing and seed development in maize.
将 161 种植物(石松类)线粒体组 II 内含子分类为 29 个相关的旁系同源物家族,发现内含子移动性和内含子携带的成熟酶之间只有有限的联系。
BMC Ecol Evol. 2023 Mar 13;23(1):5. doi: 10.1186/s12862-023-02108-y.
4
Genome-wide identification and expression analysis of the gene family in wheat ( L.).小麦(L.)中该基因家族的全基因组鉴定与表达分析。
Front Plant Sci. 2023 Feb 24;14:1124905. doi: 10.3389/fpls.2023.1124905. eCollection 2023.
5
A Systemic Investigation of Genetic Architecture and Gene Resources Controlling Kernel Size-Related Traits in Maize.系统研究玉米粒型相关性状的遗传结构和基因资源控制
Int J Mol Sci. 2023 Jan 5;24(2):1025. doi: 10.3390/ijms24021025.
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The small PPR protein SPR2 interacts with PPR-SMR1 to facilitate the splicing of introns in maize mitochondria.小 PPR 蛋白 SPR2 与 PPR-SMR1 相互作用,以促进玉米线粒体中内含子的剪接。
Plant Physiol. 2022 Oct 27;190(3):1763-1776. doi: 10.1093/plphys/kiac379.
7
, a Regulator of Chromosome Condensation 1 (RCC1) Family Protein Gene from , Negatively Regulates Salinity Stress Tolerance in Transgenic .来自 的染色体凝聚蛋白 1(RCC1)家族蛋白基因 ,作为负调控因子,降低了转基因 的耐盐性。
Int J Mol Sci. 2022 Jul 25;23(15):8172. doi: 10.3390/ijms23158172.
DYW亚组的五肽重复蛋白PPR27与ZmMORF1相互作用,以促进玉米线粒体RNA编辑和种子发育。
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Plant Cell Physiol. 2020 Feb 1;61(2):370-380. doi: 10.1093/pcp/pcz204.
6
PPR-SMR1 is required for the splicing of multiple mitochondrial introns, interacts with Zm-mCSF1, and is essential for seed development in maize.PPR-SMR1 对于多个线粒体内含子的剪接是必需的,与 Zm-mCSF1 相互作用,并且对于玉米种子发育是必需的。
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7
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8
The mitochondrial pentatricopeptide repeat protein EMP12 is involved in the splicing of three nad2 introns and seed development in maize.线粒体五重串联重复蛋白 EMP12 参与三个 nad2 内含子的剪接和玉米种子发育。
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Plant J. 2019 Feb;97(3):447-459. doi: 10.1111/tpj.14133. Epub 2018 Nov 27.
10
The pentatricopeptide repeat protein EMPTY PERICARP8 is required for the splicing of three mitochondrial introns and seed development in maize.五肽重复蛋白EMPTY PERICARP8是玉米中三个线粒体内含子剪接和种子发育所必需的。
Plant J. 2018 Jul 12. doi: 10.1111/tpj.14030.