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报春花科植物偏花报春(Franch.)的完整质体基因组:一种中国横断山特有的高山观赏植物。

Complete plastid genome of Franch. (Primulaceae): an alpine ornamental plant endemic to Hengduan Mountain, China.

作者信息

Yang Xuedan, Huang Yuan, Li Zhonghu, Chen Jiahui

机构信息

School of Life Sciences, Northwest University, Xi'an, P. R. China.

CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, P. R. China.

出版信息

Mitochondrial DNA B Resour. 2021 Aug 13;6(9):2643-2645. doi: 10.1080/23802359.2021.1963868. eCollection 2021.

DOI:10.1080/23802359.2021.1963868
PMID:34409165
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8366611/
Abstract

Franch. is an alpine species with an ornamental value that is endemic to the Hengduan Mountains of southwest China. Here, we sequenced and assembled its plastid complete genome, which is a circular molecule of 151,954 bp and contains a large single-copy (83,820 bp) and a small single-copy (17,814 bp) region, separated by a pair of inverted repeats (25,160 bp). There are 131 genes, 86 protein-coding, 37 tRNAs, and 8 rRNAs in the plastome, of which 114 genes, 80 CDSs, 30 tRNAs, and 4 rRNAs are unique, respectively. The plastid genome shows a high level of synteny with its close relatives, , , and . Phylogenetic analysis based on 60 complete chloroplast genomes of Primulaceae confirmed its delimitation in .

摘要

报春花是一种具有观赏价值的高山物种,为中国西南部横断山脉所特有。在此,我们对其质体全基因组进行了测序和组装,该基因组是一个151,954 bp的环状分子,包含一个大单拷贝区(83,820 bp)和一个小单拷贝区(17,814 bp),由一对反向重复序列(25,160 bp)隔开。质体基因组中有131个基因,其中86个为蛋白质编码基因、37个tRNA基因和8个rRNA基因,其中分别有114个基因、80个编码序列、30个tRNA基因和4个rRNA基因是独特的。该质体基因组与其近缘物种、、和显示出高度的共线性。基于报春花科60个完整叶绿体基因组的系统发育分析证实了它在中的分类地位。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e079/8366611/36e74a19614b/TMDN_A_1963868_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e079/8366611/36e74a19614b/TMDN_A_1963868_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e079/8366611/36e74a19614b/TMDN_A_1963868_F0001_C.jpg

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