Navarro Belén, Alarcón Mackarenna, Osees Maricarmen, Gómez-Alvear Felipe, Sepúlveda Romina V, Huerta Jaime, Opazo María Cecilia, Aguayo Daniel
Center for Bioinformatics and Integrative Biology (CBIB), Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago 8370146, Chile.
Instituto de Ciencias Naturales, Facultad de Medicina Veterinaria y Agronomía, Universidad de las Américas, Santiago, Chile.
MethodsX. 2021 Jul 30;8:101474. doi: 10.1016/j.mex.2021.101474. eCollection 2021.
Isothermal Titration Calorimetry (ITC) is widely employed to assess antimicrobial affinity for lipopolysaccharide (LPS); nevertheless, experiments are usually limited to commercially available-LPS chemotypes. Herein we show a method that uses Differential Scanning Calorimetry (DSC) to characterize homogeneity artificial vesicles of LPS (LPS-V) extracted from isogenic mutant bacterial strains before analyzing the antimicrobial binding by ITC. This method allows us to characterize the differences in the Polymyxin-B binding and gel to crystalline liquid (β↔α) phase profiles of LPS-V made of LPS extracted from isogenic mutant strains for the LPS biosynthesis pathway, allowing us to obtain the comparable data required for new antimicrobial discovery. A method for:•Obtaining LPS vesicles from isogenic mutant bacterial strains.•Characterize artificial LPS vesicles homogeneity.•Characterize antimicrobial binding to LPS.
等温滴定量热法(ITC)被广泛用于评估抗菌剂对脂多糖(LPS)的亲和力;然而,实验通常仅限于市售的LPS化学型。在此,我们展示了一种方法,该方法使用差示扫描量热法(DSC)来表征从同基因突变细菌菌株中提取的LPS(LPS-V)的均一性人工囊泡,然后通过ITC分析抗菌剂的结合情况。这种方法使我们能够表征由从LPS生物合成途径的同基因突变菌株中提取的LPS制成的LPS-V的多粘菌素B结合差异以及凝胶到结晶液体(β↔α)相图,从而使我们能够获得新抗菌剂发现所需的可比数据。一种用于:
• 从同基因突变细菌菌株中获得LPS囊泡。
• 表征人工LPS囊泡的均一性。
• 表征抗菌剂与LPS的结合。