Asano Akiko, Nakagawa Maki, Miyajima Chihiro, Yasui Mami, Minoura Katsuhiko, Yamada Takeshi, Doi Mitsunobu
Faculty of Pharmacy, Osaka Medical and Pharmaceutical University, Osaka, Japan.
J Pept Sci. 2021 Dec;27(12):e3363. doi: 10.1002/psc.3363. Epub 2021 Aug 30.
Ascidiacyclamide [cyclo(-Ile -oxazoline -d-Val -thiazole -) ] is a cytotoxic cyclic peptide from ascidian. Through structural analyses using monosubstituted analogues (Xaa : Ala, 2-aminobutyric acid, Val, cyclohexylglycine, and phenylglycine), we previously demonstrated the conformational equilibrium between its square and folded forms. As the bulkiness of the Xaa residue side chain was reduced, spontaneous folding was promoted, and the cytotoxicity decreased accordingly. In the present study, five disubstituted analogues in which a tert-leucine residue (Tle) was incorporated at the 5-position of the abovementioned monosubstituted analogues were synthesized, after which their structures were analyzed using X-ray diffraction, circular dichroism (CD) spectral measurements, and H NMR-based quantitative analysis. The side chains of the Tle and Ile residues are structural isomers of one another, and the Tle residue bearing the tert-butyl group can be expected to play a role as a building block. In fact, peptides incorporating Tle exhibited much less spontaneous folding than their Ile counterparts in both crystal and solution. Increases in enthalpy and entropy due to the tert-butyl group during the folding process resulted in increased conformational free energy (ΔG°). The powerful plasticity of the tert-butyl group would stabilize the square form relating with cytotoxicity.
海鞘环肽[环(-异亮氨酸-恶唑啉-缬氨酸-噻唑-)]是一种来自海鞘的细胞毒性环肽。通过使用单取代类似物(Xaa:丙氨酸、2-氨基丁酸、缬氨酸、环己基甘氨酸和苯甘氨酸)进行结构分析,我们之前证明了其方形和折叠形式之间的构象平衡。随着Xaa残基侧链体积的减小,自发折叠得到促进,细胞毒性也相应降低。在本研究中,合成了五种二取代类似物,其中在上述单取代类似物的5位引入了叔亮氨酸残基(Tle),之后使用X射线衍射、圆二色性(CD)光谱测量和基于核磁共振氢谱的定量分析对其结构进行了分析。Tle和Ile残基的侧链是彼此的结构异构体,带有叔丁基的Tle残基有望作为一个构建单元发挥作用。事实上,在晶体和溶液中,含有Tle的肽比含有Ile的肽表现出少得多的自发折叠。折叠过程中叔丁基导致的焓和熵的增加导致构象自由能(ΔG°)增加。叔丁基强大的可塑性会稳定与细胞毒性相关的方形结构。