Department of Internal Medicine, Erasmus University Medical Center, Rotterdam, Netherlands.
Department of Epidemiology, Erasmus University Medical Center, Rotterdam, Netherlands.
Front Endocrinol (Lausanne). 2021 Aug 16;12:709815. doi: 10.3389/fendo.2021.709815. eCollection 2021.
Musculoskeletal research has been enriched in the past ten years with a great wealth of new discoveries arising from genome wide association studies (GWAS). In addition to the novel factors identified by GWAS, the advent of whole-genome and whole-exome sequencing efforts in family based studies has also identified new genes and pathways. However, the function and the mechanisms by which such genes influence clinical traits remain largely unknown. There is imperative need to bring multidisciplinary expertise together that will allow translating these genomic discoveries into useful clinical applications with the potential of improving patient care. Therefore "GEnomics of MusculoSkeletal traits TranslatiOnal NEtwork" (GEMSTONE) aims to set the ground for the: 1) functional characterization of discovered genes and pathways; 2) understanding of the correspondence between molecular and clinical assessments; and 3) implementation of novel methodological approaches. This research network is funded by (COST). GEMSTONE includes six working groups (WG), each with specific objectives: WG1- creating, maintaining and updating an inventory of experts and resources (studies and datasets) participating in the network, helping to assemble focus groups defined by phenotype, functional and methodological expertise. WG2- describe ways to decompose the phenotypes of the different functional studies into meaningful components that will aid the interpretation of identified biological pathways. WG3 makes an inventory of genes underlying musculoskeletal monogenic conditions that aids the assignment of genes to GWAS signals and prioritizing GWAS genes as candidates responsible for monogenic presentations, through biological plausibility. WG4 : creating a roadmap of genes and pathways to be prioritized for functional assessment in cell and organism models of the musculoskeletal system. WG5 seeks the integration of the knowledge derived from the distinct efforts, with particular emphasis on systems biology and artificial intelligence applications. Finally, WG6 : makes a synopsis of the knowledge derived from the distinct efforts, allowing to prioritize factors within biological pathways, use refined disease trait definitions and/or improve study design of future investigations in a potential therapeutic context (e.g. clinical trials) for musculoskeletal diseases.
过去十年,随着全基因组关联研究(GWAS)带来的大量新发现,肌肉骨骼研究得到了丰富。除了 GWAS 确定的新型因素外,基于家族的全基因组和全外显子组测序工作的出现也确定了新的基因和途径。然而,这些基因影响临床特征的功能和机制在很大程度上仍然未知。迫切需要汇集多学科专业知识,将这些基因组发现转化为具有改善患者护理潜力的有用临床应用。因此,“肌肉骨骼特征转化翻译网络的基因组学”(GEMSTONE)旨在为以下方面奠定基础:1)发现基因和途径的功能特征化;2)理解分子和临床评估之间的对应关系;3)实施新的方法学方法。该研究网络由(COST)资助。GEMSTONE 包括六个工作组(WG),每个工作组都有特定的目标:WG1- 创建、维护和更新参与网络的专家和资源(研究和数据集)清单,帮助按照表型、功能和方法学专业知识定义焦点小组。WG2- 将不同功能研究的表型分解为有意义的成分,以帮助解释已识别的生物途径。WG3 编制了肌肉骨骼单基因疾病相关基因清单,通过生物学合理性将基因分配给 GWAS 信号,并将 GWAS 基因优先分配为负责单基因表现的候选基因。WG4:制定肌肉骨骼系统细胞和生物体模型中优先进行功能评估的基因和途径路线图。WG5 寻求整合来自不同努力的知识,特别强调系统生物学和人工智能应用。最后,WG6:对来自不同努力的知识进行总结,允许在生物途径内优先考虑因素,使用精炼的疾病特征定义和/或改善未来研究的研究设计,以在肌肉骨骼疾病的潜在治疗环境(例如临床试验)中。