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3-(5-(1-咪唑-1-基)戊-1-烯-1-基)-9-乙基-9-咔唑:合成、表征(IR、NMR)、DFT、抗菌抗氧化活性及对接研究。

3-(5-(1-imidazol-1-yl) pent-1-en-1-yl)-9-ethyl-9-carbazole: synthesis, characterization (IR, NMR), DFT, antimicrobial-antioxidant activities and docking study.

机构信息

Faculty of Sciences, Department of Chemistry, Karadeniz Technical University, Trabzon, Turkey.

Vocational School of Technical Sciences, Gazi University, Ankara, Turkey.

出版信息

J Biomol Struct Dyn. 2022;40(23):12990-13000. doi: 10.1080/07391102.2021.1977708. Epub 2021 Sep 13.

DOI:10.1080/07391102.2021.1977708
PMID:34514967
Abstract

3-(5-(1-imidazol-1-yl) pent-1-en-1-yl)-9-ethyl-9-carbazole called as compound 1 was synthesized and characterized by proton and carbon-13 nuclear magnetic resonance (H- and C- NMR) and Fourier transform infrared (FTIR) spectroscopic methods. Density Functional Theory/Becke, 3-parameter (DFT/B3LYP), for compound 1 were performed with 6-311++G(d,p) method. Optimized geometry, frontier molecular orbitals (HOMO; highest occupied molecular orbital; LUMO: lowest unoccupied molecular orbital), IR and NMR parameters of compound 1 were obtained. The evaluations reveal that the calculation results support the experimental results. In addition, the antimicrobial (a microwell dilution method) and antioxidant activities (2,2-Diphenyl-1-picrylhydrazyl (DPPH), 2,2'-azino-bis-(3-ethylbenzothiazoline-6-sulfonate) (ABTS) ferric ion reducing antioxidant power (FRAP) of compound 1 were evaluated. According to the results obtained, it showed higher antimicrobial activity (Minimal inhibition concentration (MIC): 78.12 µg/mL) against subsp. . Morever, molecular docking studies were carried out to investigate the interactions of an antimicrobial agent on some important enzymes played important roles in nucleic acid (Deoxyribo nucleic acid (DNA) synthesis, cell wall synthesis, protein synthesis, and metabolism etc. The compound 1 was strongly bound to tyrosyl-tRNA synthetase enzyme (binding energy: -11.18 and K: 6.37 nM) and Beta-Ketoacyl-Acp Synthase III enzyme (binding energy: -10.29 and K: 28.47 nM).Communicated by Ramaswamy H. Sarma.

摘要

3-(5-(1-咪唑-1-基)戊-1-烯-1-基)-9-乙基-9-咔唑称为化合物 1,通过质子和碳-13 核磁共振(H-和 C-NMR)和傅里叶变换红外(FTIR)光谱方法进行合成和表征。使用 6-311++G(d,p)方法对化合物 1 进行了密度泛函理论/Becke,3-参数(DFT/B3LYP)计算。得到了化合物 1 的优化几何形状、前沿分子轨道(HOMO;最高占据分子轨道;LUMO:最低未占据分子轨道)、IR 和 NMR 参数。评估结果表明,计算结果支持实验结果。此外,还评估了化合物 1 的抗菌(微量稀释法)和抗氧化活性(2,2-二苯基-1-苦基肼(DPPH)、2,2'-联氮双-(3-乙基苯并噻唑啉-6-磺酸)(ABTS)铁还原抗氧化能力(FRAP)。根据所得结果,它对 subsp. 表现出较高的抗菌活性(最小抑制浓度(MIC):78.12 µg/mL)。此外,还进行了分子对接研究,以研究抗菌剂与在核酸(脱氧核糖核酸(DNA)合成、细胞壁合成、蛋白质合成和代谢等方面发挥重要作用的一些重要酶之间的相互作用。该化合物 1 与酪氨酸-tRNA 合成酶酶(结合能:-11.18 和 K:6.37 nM)和 Beta-Ketoacyl-Acp Synthase III 酶(结合能:-10.29 和 K:28.47 nM)结合紧密。由 Ramaswamy H. Sarma 传达。

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