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张量电阻抗肌图可识别肌萎缩侧索硬化症的临床相关特征。

Tensor electrical impedance myography identifies clinically relevant features in amyotrophic lateral sclerosis.

机构信息

Sheffield Institute for Translational Neuroscience, University of Sheffield, United Kingdom.

Department of Automatic Control and Systems Engineering, University of Sheffield, United Kingdom.

出版信息

Physiol Meas. 2021 Nov 2;42(10). doi: 10.1088/1361-6579/ac2672.

DOI:10.1088/1361-6579/ac2672
PMID:34521070
Abstract

Electrical impedance myography (EIM) shows promise as an effective biomarker in amyotrophic lateral sclerosis (ALS). EIM applies multiple input frequencies to characterise muscle properties, often via multiple electrode configurations. Herein, we assess if non-negative tensor factorisation (NTF) can provide a framework for identifying clinically relevant features within a high dimensional EIM dataset.EIM data were recorded from the tongue of healthy and ALS diseased individuals. Resistivity and reactivity measurements were made for 14 frequencies, in three electrode configurations. This gives 84 (2 × 14 × 3) distinct data points per participant. NTF was applied to the dataset for dimensionality reduction, termed tensor EIM. Significance tests, symptom correlation and classification approaches were explored to compare NTF to using all raw data and feature selection.Tensor EIM provides highly significant differentiation between healthy and ALS patients (< 0.001, AUROC = 0.78). Similarly tensor EIM differentiates between mild and severe disease states (< 0.001, AUROC = 0.75) and significantly correlates with symptoms (= 0.7,< 0.001). A trend of centre frequency shifting to the right was identified in diseased spectra, which is in line with the electrical changes expected following muscle atrophy.Tensor EIM provides clinically relevant metrics for identifying ALS-related muscle disease. This procedure has the advantage of using the whole spectral dataset, with reduced risk of overfitting. The process identifies spectral shapes specific to disease allowing for a deeper clinical interpretation.

摘要

电阻抗肌图(EIM)有望成为肌萎缩侧索硬化症(ALS)的有效生物标志物。EIM 通过多种电极配置应用多个输入频率来描述肌肉特性。在此,我们评估非负张量分解(NTF)是否可以为高维 EIM 数据集内的临床相关特征提供一个识别框架。

EIM 数据来自健康和 ALS 患病个体的舌头。对 14 种频率的电阻率和反应性进行了测量,采用了三种电极配置。这使得每个参与者有 84 个(2×14×3)独特的数据点。NTF 应用于数据集进行降维,称为张量 EIM。为了比较 NTF 与使用所有原始数据和特征选择的方法,我们探索了显著性检验、症状相关性和分类方法。

张量 EIM 在健康和 ALS 患者之间提供了高度显著的区分(<0.001,AUROC=0.78)。同样,张量 EIM 区分了轻度和重度疾病状态(<0.001,AUROC=0.75),并且与症状显著相关(=0.7,<0.001)。在患病光谱中,中心频率向右移动的趋势被识别出来,这与肌肉萎缩后预期的电变化一致。

张量 EIM 为识别 ALS 相关肌肉疾病提供了临床相关的指标。该过程具有使用整个光谱数据集的优势,降低了过度拟合的风险。该过程识别出与疾病特异性相关的光谱形状,从而可以进行更深入的临床解释。

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Non-negative matrix factorisation of Raman spectra finds common patterns relating to neuromuscular disease across differing equipment configurations, preclinical models and human tissue.拉曼光谱的非负矩阵分解发现了在不同设备配置、临床前模型和人体组织中与神经肌肉疾病相关的共同模式。
J Raman Spectrosc. 2023 Mar;54(3):258-268. doi: 10.1002/jrs.6480. Epub 2022 Dec 22.
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Label-free fibre optic Raman spectroscopy with bounded simplex-structured matrix factorization for the serial study of serum in amyotrophic lateral sclerosis.
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