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质子离子液体对甘氨酸基肽水合作用的影响。

Influence of protic ionic liquids on hydration of glycine based peptides.

机构信息

Department of Chemistry, Shivaji University, Kolhapur 416004, Maharashtra, India.

Department of Chemistry, Rajaram College, Kolhapur 416004, India.

出版信息

Spectrochim Acta A Mol Biomol Spectrosc. 2022 Jan 15;265:120378. doi: 10.1016/j.saa.2021.120378. Epub 2021 Sep 10.

Abstract

The structure of water, especially around the solute is thought to play an important role in many biological and chemical processes. Water-peptide and cosolvent-peptide interactions are crucial in determining the structure and function of protein molecules. In this work, we present the H-bonding analysis for model peptides like glycyl-glycine (gly-gly), glycine-ւ-valine (gly-val), glycyl-ւ-leucine (gly-leu) and triglycine (trigly) and triethylammonium based carboxylate protic ionic liquids (PILs) in aqueous solutions as well as for peptides in ∼0.2 mol·L of aqueous PIL solutions in the spectral range of 7800-5500 cm using Fourier transform near-infrared (FT-NIR) spectroscopy at 298.15 K. The hydration numbers for peptides and PILs were obtained using NIR method of simultaneous estimation of hydration spectrum and hydration number of a solute dissolved in water. The H-bond of water molecules around peptides and PILs are found to be stronger and shorter than those in pure liquid water. We observe that the hydration shell around zwitterions is a clathrate-like cluster of water in which ions entrap. Watery network analysis confirms that singly H-bonded species or NHBs changes to partial or distorted ice-like structures of water in the hydration shell of PILs. The overall water H-bonding in the hydration sphere of PILs increases in the order TEAF < TEAA < TEAG < TEAPy ≈ TEAP < TEAB. The influence of PILs on hydration behavior of peptides is explored in terms of H-bonding, cooperativity, hydrophobicity, water structural changes, ionic interactions etc.

摘要

水的结构,特别是在溶质周围,被认为在许多生物和化学过程中起着重要作用。水-肽和共溶剂-肽相互作用对于确定蛋白质分子的结构和功能至关重要。在这项工作中,我们在 298.15 K 下使用傅里叶变换近红外(FT-NIR)光谱,在 7800-5500 cm 的光谱范围内,对甘氨酰-甘氨酸(gly-gly)、甘氨酸-缬氨酸(gly-val)、甘氨酰-亮氨酸(gly-leu)和三甘氨酸(trigly)等模型肽以及在约 0.2 mol·L 的水溶液中肽的氢键分析,基于三乙基铵的羧酸质子离子液体(PILs)。使用 NIR 法同时估算溶解在水中的溶质的水合光谱和水合数,获得了肽和 PIL 的水合数。发现肽和 PIL 周围水分子的氢键比纯液态水中的氢键更强、更短。我们观察到两性离子周围的水合壳是水的笼状簇,其中离子被捕获。含水网络分析证实,单氢键合物种或 NHBs 会在 PIL 的水合壳中部分或扭曲成类似冰的水结构。PILs 在水合球中的整体水氢键合程度按 TEAF < TEAA < TEAG < TEAPy ≈ TEAP < TEAB 的顺序增加。从氢键合、协同作用、疏水性、水结构变化、离子相互作用等方面探讨了 PILs 对肽水合行为的影响。

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